Gene : Glyma.06G099100 G. max Wm82.a2.v1
Defline:  (1 of 701) PF01535 - PPR repeat (PPR) Genomic Order:  991
Name:  ? Glyma.06G099100 Secondary Identifier:  ? PAC:30549487
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G099100 0.5kb upstream 0.5kb upstream 4260 true Chr06: 7880892-7885151 Glycine max
Glyma.06G099100 0.5kb upstream 0.5kb upstream 500 false Chr06: 7884652-7885151 Glycine max
Glyma.06G099100 0.5kb downstream 0.5kb downstream 4260 true Chr06: 7880392-7884651 Glycine max
Glyma.06G099100 0.5kb downstream 0.5kb downstream 500 false Chr06: 7880392-7880891 Glycine max
Glyma.06G099100 1.0kb upstream 1.0kb upstream 4760 true Chr06: 7880892-7885651 Glycine max
Glyma.06G099100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7884652-7885651 Glycine max
Glyma.06G099100 1.0kb downstream 1.0kb downstream 4760 true Chr06: 7879892-7884651 Glycine max
Glyma.06G099100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7879892-7880891 Glycine max
Glyma.06G099100 2.0kb upstream 2.0kb upstream 5760 true Chr06: 7880892-7886651 Glycine max
Glyma.06G099100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7884652-7886651 Glycine max
Glyma.06G099100 2.0kb downstream 2.0kb downstream 5760 true Chr06: 7878892-7884651 Glycine max
Glyma.06G099100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7878892-7880891 Glycine max
Glyma.06G099100 5.0kb upstream 5.0kb upstream 8760 true Chr06: 7880892-7889651 Glycine max
Glyma.06G099100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7884652-7889651 Glycine max
Glyma.06G099100 5.0kb downstream 5.0kb downstream 8760 true Chr06: 7875892-7884651 Glycine max
Glyma.06G099100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7875892-7880891 Glycine max
Glyma.06G099100 10.0kb upstream 10.0kb upstream 13760 true Chr06: 7880892-7894651 Glycine max
Glyma.06G099100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7884652-7894651 Glycine max
Glyma.06G099100 10.0kb downstream 10.0kb downstream 13760 true Chr06: 7870892-7884651 Glycine max
Glyma.06G099100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7870892-7880891 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307467 5265 Fabidae View MSA
124062477 5270 Rosid View MSA
123739540 5271 Pentapetalae View MSA
122790225 5272 Eudicot View MSA
122049132 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.26464 0.0 6.72877    
cufflinks 0.750834 0.0 4.91    
cufflinks 1.83896 0.0 8.487   High
cufflinks 1.09674 0.0 5.80922    
cufflinks 0.505049 0.0 3.23795   Low
cufflinks 0.712987 0.0 4.14378    
cufflinks 1.84936 0.0 8.56025   High
cufflinks 0.729688 0.0 4.32227    
cufflinks 0.74018 0.0 4.34029    
cufflinks 0.098     Low Low
cufflinks 0.1       Low
cufflinks 0.405       High
cufflinks 0.119        
cufflinks 0.156        
cufflinks 0.407       High
cufflinks 0.306        
cufflinks 0.125        
cufflinks 0.415       High
cufflinks 0.354        
cufflinks 0.397        
cufflinks 0.115       Low
cufflinks 0.332        
cufflinks 0.447       High
cufflinks 0.128        
cufflinks 0.357        
cufflinks 0.107       Low

0 Strain