Gene : Glyma.06G103200 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR11455:SF24 - CRYPTOCHROME-1 Genomic Order:  1032
Name:  ? Glyma.06G103200 Secondary Identifier:  ? PAC:30549388
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G103200 0.5kb upstream 0.5kb upstream 6270 true Chr06: 8205073-8211342 Glycine max
Glyma.06G103200 0.5kb upstream 0.5kb upstream 500 false Chr06: 8210843-8211342 Glycine max
Glyma.06G103200 0.5kb downstream 0.5kb downstream 6270 true Chr06: 8204573-8210842 Glycine max
Glyma.06G103200 0.5kb downstream 0.5kb downstream 500 false Chr06: 8204573-8205072 Glycine max
Glyma.06G103200 1.0kb upstream 1.0kb upstream 6770 true Chr06: 8205073-8211842 Glycine max
Glyma.06G103200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 8210843-8211842 Glycine max
Glyma.06G103200 1.0kb downstream 1.0kb downstream 6770 true Chr06: 8204073-8210842 Glycine max
Glyma.06G103200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 8204073-8205072 Glycine max
Glyma.06G103200 2.0kb upstream 2.0kb upstream 7770 true Chr06: 8205073-8212842 Glycine max
Glyma.06G103200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 8210843-8212842 Glycine max
Glyma.06G103200 2.0kb downstream 2.0kb downstream 7770 true Chr06: 8203073-8210842 Glycine max
Glyma.06G103200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 8203073-8205072 Glycine max
Glyma.06G103200 5.0kb upstream 5.0kb upstream 10770 true Chr06: 8205073-8215842 Glycine max
Glyma.06G103200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 8210843-8215842 Glycine max
Glyma.06G103200 5.0kb downstream 5.0kb downstream 10770 true Chr06: 8200073-8210842 Glycine max
Glyma.06G103200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 8200073-8205072 Glycine max
Glyma.06G103200 10.0kb upstream 10.0kb upstream 15770 true Chr06: 8205073-8220842 Glycine max
Glyma.06G103200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 8210843-8220842 Glycine max
Glyma.06G103200 10.0kb downstream 10.0kb downstream 15770 true Chr06: 8195073-8210842 Glycine max
Glyma.06G103200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 8195073-8205072 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314673 5265 Fabidae View MSA
124068248 5270 Rosid View MSA
123736970 5271 Pentapetalae View MSA
122788964 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 118.095 0.0 1169.25 High High
cufflinks 14.2784 0.0 64.2281    
cufflinks 23.8817 0.0 118.454 High  
cufflinks 25.7552 0.0 125.544 High  
cufflinks 4.7564 0.0 20.7308    
cufflinks 6.1624 0.0 29.1846    
cufflinks 11.1745 0.0 49.9201    
cufflinks 29.7651 0.0 153.177 High  
cufflinks 2.69267 0.0 13.5039   Low
cufflinks 2.419        
cufflinks 0.103       Low
cufflinks 2.699        
cufflinks 0.101       Low
cufflinks 0.06     Low Low
cufflinks 0.163        
cufflinks 7.773     High High
cufflinks 0.205        
cufflinks 1.918        
cufflinks 1.883        
cufflinks 8.619     High High
cufflinks 0.242        
cufflinks 8.529     High High
cufflinks 4.536        
cufflinks 0.259        
cufflinks 9.129     High High
cufflinks 0.121       Low

0 Strain