Gene : Glyma.06G093400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31100:SF1 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 17-RELATED Genomic Order:  934
Name:  ? Glyma.06G093400 Secondary Identifier:  ? PAC:30550106
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G093400 0.5kb upstream 0.5kb upstream 3046 true Chr06: 7353187-7356232 Glycine max
Glyma.06G093400 0.5kb upstream 0.5kb upstream 500 false Chr06: 7353187-7353686 Glycine max
Glyma.06G093400 0.5kb downstream 0.5kb downstream 3046 true Chr06: 7353687-7356732 Glycine max
Glyma.06G093400 0.5kb downstream 0.5kb downstream 500 false Chr06: 7356233-7356732 Glycine max
Glyma.06G093400 1.0kb upstream 1.0kb upstream 3546 true Chr06: 7352687-7356232 Glycine max
Glyma.06G093400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7352687-7353686 Glycine max
Glyma.06G093400 1.0kb downstream 1.0kb downstream 3546 true Chr06: 7353687-7357232 Glycine max
Glyma.06G093400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7356233-7357232 Glycine max
Glyma.06G093400 2.0kb upstream 2.0kb upstream 4546 true Chr06: 7351687-7356232 Glycine max
Glyma.06G093400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7351687-7353686 Glycine max
Glyma.06G093400 2.0kb downstream 2.0kb downstream 4546 true Chr06: 7353687-7358232 Glycine max
Glyma.06G093400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7356233-7358232 Glycine max
Glyma.06G093400 5.0kb upstream 5.0kb upstream 7546 true Chr06: 7348687-7356232 Glycine max
Glyma.06G093400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7348687-7353686 Glycine max
Glyma.06G093400 5.0kb downstream 5.0kb downstream 7546 true Chr06: 7353687-7361232 Glycine max
Glyma.06G093400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7356233-7361232 Glycine max
Glyma.06G093400 10.0kb upstream 10.0kb upstream 12546 true Chr06: 7343687-7356232 Glycine max
Glyma.06G093400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7343687-7353686 Glycine max
Glyma.06G093400 10.0kb downstream 10.0kb downstream 12546 true Chr06: 7353687-7366232 Glycine max
Glyma.06G093400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7356233-7366232 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304898 5265 Fabidae View MSA
124070322 5270 Rosid View MSA
123746080 5271 Pentapetalae View MSA
122793213 5272 Eudicot View MSA
122046470 5273 Angiosperm View MSA
121310610 5274 Embryophyte View MSA
123348051 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.30925 0.0 14.9194   High
cufflinks 0.919089 0.0 3.22298    
cufflinks 0.907041 0.0 3.18927    
cufflinks 0.559289 0.0 2.03098    
cufflinks 1.8546 0.0 5.96304    
cufflinks 1.34566 0.0 4.52013    
cufflinks 0.361136 0.0 1.34151   Low
cufflinks 2.64131 0.0 8.12708    
cufflinks 1.28354 0.0 4.34229    
cufflinks 1.02        
cufflinks 4.761       High
cufflinks 0.659        
cufflinks 0.743        
cufflinks 1.207        
cufflinks 4.556       High
cufflinks 0.201       Low
cufflinks 1.406        
cufflinks 0.744        
cufflinks 1.654        
cufflinks 0.16       Low
cufflinks 4.946       High
cufflinks 0.253        
cufflinks 0.125       Low
cufflinks 3.755       High
cufflinks 0.136       Low
cufflinks 6.022       High

0 Strain