Gene : Glyma.06G093500 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Genomic Order:  935
Name:  ? Glyma.06G093500 Secondary Identifier:  ? PAC:30551125
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G093500 0.5kb upstream 0.5kb upstream 6846 true Chr06: 7371200-7378045 Glycine max
Glyma.06G093500 0.5kb upstream 0.5kb upstream 500 false Chr06: 7377546-7378045 Glycine max
Glyma.06G093500 0.5kb downstream 0.5kb downstream 6846 true Chr06: 7370700-7377545 Glycine max
Glyma.06G093500 0.5kb downstream 0.5kb downstream 500 false Chr06: 7370700-7371199 Glycine max
Glyma.06G093500 1.0kb upstream 1.0kb upstream 7346 true Chr06: 7371200-7378545 Glycine max
Glyma.06G093500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7377546-7378545 Glycine max
Glyma.06G093500 1.0kb downstream 1.0kb downstream 7346 true Chr06: 7370200-7377545 Glycine max
Glyma.06G093500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7370200-7371199 Glycine max
Glyma.06G093500 2.0kb upstream 2.0kb upstream 8346 true Chr06: 7371200-7379545 Glycine max
Glyma.06G093500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7377546-7379545 Glycine max
Glyma.06G093500 2.0kb downstream 2.0kb downstream 8346 true Chr06: 7369200-7377545 Glycine max
Glyma.06G093500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7369200-7371199 Glycine max
Glyma.06G093500 5.0kb upstream 5.0kb upstream 11346 true Chr06: 7371200-7382545 Glycine max
Glyma.06G093500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7377546-7382545 Glycine max
Glyma.06G093500 5.0kb downstream 5.0kb downstream 11346 true Chr06: 7366200-7377545 Glycine max
Glyma.06G093500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7366200-7371199 Glycine max
Glyma.06G093500 10.0kb upstream 10.0kb upstream 16346 true Chr06: 7371200-7387545 Glycine max
Glyma.06G093500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7377546-7387545 Glycine max
Glyma.06G093500 10.0kb downstream 10.0kb downstream 16346 true Chr06: 7361200-7377545 Glycine max
Glyma.06G093500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7361200-7371199 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243861 5265 Fabidae Singleton cluster - no MSA
124041569 5270 Rosid View MSA
123744401 5271 Pentapetalae View MSA
122795716 5272 Eudicot View MSA
122046939 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.63226 0.0 13.6329    
cufflinks 3.30227 0.0 12.5379    
cufflinks 3.81127 0.0 13.9357    
cufflinks 6.12145 0.0 21.1604   High
cufflinks 3.06558 0.0 11.8633    
cufflinks 2.14479 0.0 7.76512   Low
cufflinks 6.54174 0.0 22.6826   High
cufflinks 3.6036 0.0 13.3215    
cufflinks 6.13168 0.0 21.2875   High
cufflinks 1.499        
cufflinks 1.899        
cufflinks 2.052        
cufflinks 0.799       Low
cufflinks 0.831       Low
cufflinks 3.909       High
cufflinks 1.122        
cufflinks 1.931        
cufflinks 2.557       High
cufflinks 1.825        
cufflinks 0.978       Low
cufflinks 1.956        
cufflinks 1.124        
cufflinks 1.204        
cufflinks 2.189        
cufflinks 0.854       Low
cufflinks 2.544       High

0 Strain