Gene : Glyma.06G096000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR30566//PTHR30566:SF12 - YNAI-RELATED MECHANOSENSITIVE ION CHANNEL Genomic Order:  960
Name:  ? Glyma.06G096000 Secondary Identifier:  ? PAC:30549186
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G096000 0.5kb upstream 0.5kb upstream 7546 true Chr06: 7582183-7589728 Glycine max
Glyma.06G096000 0.5kb upstream 0.5kb upstream 500 false Chr06: 7589229-7589728 Glycine max
Glyma.06G096000 0.5kb downstream 0.5kb downstream 7546 true Chr06: 7581683-7589228 Glycine max
Glyma.06G096000 0.5kb downstream 0.5kb downstream 500 false Chr06: 7581683-7582182 Glycine max
Glyma.06G096000 1.0kb upstream 1.0kb upstream 8046 true Chr06: 7582183-7590228 Glycine max
Glyma.06G096000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 7589229-7590228 Glycine max
Glyma.06G096000 1.0kb downstream 1.0kb downstream 8046 true Chr06: 7581183-7589228 Glycine max
Glyma.06G096000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 7581183-7582182 Glycine max
Glyma.06G096000 2.0kb upstream 2.0kb upstream 9046 true Chr06: 7582183-7591228 Glycine max
Glyma.06G096000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 7589229-7591228 Glycine max
Glyma.06G096000 2.0kb downstream 2.0kb downstream 9046 true Chr06: 7580183-7589228 Glycine max
Glyma.06G096000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 7580183-7582182 Glycine max
Glyma.06G096000 5.0kb upstream 5.0kb upstream 12046 true Chr06: 7582183-7594228 Glycine max
Glyma.06G096000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 7589229-7594228 Glycine max
Glyma.06G096000 5.0kb downstream 5.0kb downstream 12046 true Chr06: 7577183-7589228 Glycine max
Glyma.06G096000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 7577183-7582182 Glycine max
Glyma.06G096000 10.0kb upstream 10.0kb upstream 17046 true Chr06: 7582183-7599228 Glycine max
Glyma.06G096000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 7589229-7599228 Glycine max
Glyma.06G096000 10.0kb downstream 10.0kb downstream 17046 true Chr06: 7572183-7589228 Glycine max
Glyma.06G096000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 7572183-7582182 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656084 5273 Angiosperm View MSA
122297322 5265 Fabidae View MSA
124035990 5270 Rosid View MSA
123609419 5271 Pentapetalae View MSA
122644067 5272 Eudicot View MSA
120928174 5274 Embryophyte View MSA
123427972 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.72569 0.0 26.0857    
cufflinks 5.78162 0.0 19.763    
cufflinks 9.56068 0.0 34.9244   High
cufflinks 4.35149 0.0 15.9226    
cufflinks 1.8225 0.0 9.05249   Low
cufflinks 3.52013 0.0 13.6578    
cufflinks 1.82886 0.0 9.01362   Low
cufflinks 4.74957 0.0 17.0487    
cufflinks 1.85414 0.0 9.25849   Low
cufflinks 0.434        
cufflinks 0.205       Low
cufflinks 1.561       High
cufflinks 0.391        
cufflinks 0.292        
cufflinks 0.171       Low
cufflinks 1.0        
cufflinks 0.455        
cufflinks 1.112        
cufflinks 1.286        
cufflinks 1.533       High
cufflinks 0.131       Low
cufflinks 1.599       High
cufflinks 1.251        
cufflinks 0.228       Low
cufflinks 1.324        
cufflinks 0.41        

0 Strain