Gene : Glyma.06G137800 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  1378
Name:  ? Glyma.06G137800 Secondary Identifier:  ? PAC:30550364
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G137800 0.5kb upstream 0.5kb upstream 2513 true Chr06: 11256021-11258533 Glycine max
Glyma.06G137800 0.5kb upstream 0.5kb upstream 500 false Chr06: 11256021-11256520 Glycine max
Glyma.06G137800 0.5kb downstream 0.5kb downstream 2513 true Chr06: 11256521-11259033 Glycine max
Glyma.06G137800 0.5kb downstream 0.5kb downstream 500 false Chr06: 11258534-11259033 Glycine max
Glyma.06G137800 1.0kb upstream 1.0kb upstream 3013 true Chr06: 11255521-11258533 Glycine max
Glyma.06G137800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11255521-11256520 Glycine max
Glyma.06G137800 1.0kb downstream 1.0kb downstream 3013 true Chr06: 11256521-11259533 Glycine max
Glyma.06G137800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11258534-11259533 Glycine max
Glyma.06G137800 2.0kb upstream 2.0kb upstream 4013 true Chr06: 11254521-11258533 Glycine max
Glyma.06G137800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11254521-11256520 Glycine max
Glyma.06G137800 2.0kb downstream 2.0kb downstream 4013 true Chr06: 11256521-11260533 Glycine max
Glyma.06G137800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11258534-11260533 Glycine max
Glyma.06G137800 5.0kb upstream 5.0kb upstream 7013 true Chr06: 11251521-11258533 Glycine max
Glyma.06G137800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11251521-11256520 Glycine max
Glyma.06G137800 5.0kb downstream 5.0kb downstream 7013 true Chr06: 11256521-11263533 Glycine max
Glyma.06G137800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11258534-11263533 Glycine max
Glyma.06G137800 10.0kb upstream 10.0kb upstream 12013 true Chr06: 11246521-11258533 Glycine max
Glyma.06G137800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11246521-11256520 Glycine max
Glyma.06G137800 10.0kb downstream 10.0kb downstream 12013 true Chr06: 11256521-11268533 Glycine max
Glyma.06G137800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11258534-11268533 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313080 5265 Fabidae View MSA
124062483 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.6012 0.0 36.9627   Low
cufflinks 37.6808 0.0 101.34 High  
cufflinks 8.91039 0.0 25.1106   Low
cufflinks 27.7747 0.0 74.1462 High  
cufflinks 41.5219 0.0 112.363 High High
cufflinks 22.5491 0.0 60.1943    
cufflinks 34.0612 0.0 91.2873 High  
cufflinks 30.2586 0.0 80.8982 High  
cufflinks 27.7282 0.0 74.0102 High  
cufflinks 20.451     High  
cufflinks 4.252       Low
cufflinks 14.45     High  
cufflinks 33.168     High High
cufflinks 49.803     High High
cufflinks 6.068     High Low
cufflinks 16.414     High  
cufflinks 10.791     High  
cufflinks 17.354     High  
cufflinks 27.959     High High
cufflinks 13.644     High  
cufflinks 6.532     High Low
cufflinks 13.945     High  
cufflinks 20.605     High  
cufflinks 5.576       Low
cufflinks 14.328     High  
cufflinks 9.729     High  

0 Strain