Gene : Glyma.06G138400 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11655//PTHR11655:SF18 - 60S/50S RIBOSOMAL PROTEIN L6/L9 Genomic Order:  1384
Name:  ? Glyma.06G138400 Secondary Identifier:  ? PAC:30549561
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G138400 0.5kb upstream 0.5kb upstream 1646 true Chr06: 11301999-11303644 Glycine max
Glyma.06G138400 0.5kb upstream 0.5kb upstream 500 false Chr06: 11301999-11302498 Glycine max
Glyma.06G138400 0.5kb downstream 0.5kb downstream 1646 true Chr06: 11302499-11304144 Glycine max
Glyma.06G138400 0.5kb downstream 0.5kb downstream 500 false Chr06: 11303645-11304144 Glycine max
Glyma.06G138400 1.0kb upstream 1.0kb upstream 2146 true Chr06: 11301499-11303644 Glycine max
Glyma.06G138400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11301499-11302498 Glycine max
Glyma.06G138400 1.0kb downstream 1.0kb downstream 2146 true Chr06: 11302499-11304644 Glycine max
Glyma.06G138400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11303645-11304644 Glycine max
Glyma.06G138400 2.0kb upstream 2.0kb upstream 3146 true Chr06: 11300499-11303644 Glycine max
Glyma.06G138400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11300499-11302498 Glycine max
Glyma.06G138400 2.0kb downstream 2.0kb downstream 3146 true Chr06: 11302499-11305644 Glycine max
Glyma.06G138400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11303645-11305644 Glycine max
Glyma.06G138400 5.0kb upstream 5.0kb upstream 6146 true Chr06: 11297499-11303644 Glycine max
Glyma.06G138400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11297499-11302498 Glycine max
Glyma.06G138400 5.0kb downstream 5.0kb downstream 6146 true Chr06: 11302499-11308644 Glycine max
Glyma.06G138400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11303645-11308644 Glycine max
Glyma.06G138400 10.0kb upstream 10.0kb upstream 11146 true Chr06: 11292499-11303644 Glycine max
Glyma.06G138400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11292499-11302498 Glycine max
Glyma.06G138400 10.0kb downstream 10.0kb downstream 11146 true Chr06: 11302499-11313644 Glycine max
Glyma.06G138400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11303645-11313644 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311013 5265 Fabidae View MSA
124074174 5270 Rosid View MSA
123746970 5271 Pentapetalae View MSA
122791041 5272 Eudicot View MSA
122049178 5273 Angiosperm View MSA
121350412 5274 Embryophyte View MSA
123424125 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.9625 0.0 153.115 High  
cufflinks 76.3183 0.0 208.506 High  
cufflinks 34.0105 0.0 90.8368 High Low
cufflinks 40.0333 0.0 106.807 High Low
cufflinks 108.019 0.0 305.302 High High
cufflinks 110.757 0.0 313.628 High High
cufflinks 111.104 0.0 314.025 High High
cufflinks 64.7934 0.0 175.167 High  
cufflinks 69.6306 0.0 189.13 High  
cufflinks 63.72     High  
cufflinks 8.111     High Low
cufflinks 39.234     High  
cufflinks 121.149     High High
cufflinks 175.846     High High
cufflinks 9.119     High Low
cufflinks 45.082     High  
cufflinks 34.743     High  
cufflinks 36.621     High  
cufflinks 65.956     High  
cufflinks 28.614     High  
cufflinks 17.445     High  
cufflinks 33.366     High  
cufflinks 63.24     High  
cufflinks 13.772     High Low
cufflinks 40.017     High  
cufflinks 23.76     High  

0 Strain