Gene : Glyma.06G138600 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR11655//PTHR11655:SF18 - 60S/50S RIBOSOMAL PROTEIN L6/L9 Genomic Order:  1386
Name:  ? Glyma.06G138600 Secondary Identifier:  ? PAC:30553223
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G138600 0.5kb upstream 0.5kb upstream 1543 true Chr06: 11318029-11319571 Glycine max
Glyma.06G138600 0.5kb upstream 0.5kb upstream 500 false Chr06: 11319072-11319571 Glycine max
Glyma.06G138600 0.5kb downstream 0.5kb downstream 1543 true Chr06: 11317529-11319071 Glycine max
Glyma.06G138600 0.5kb downstream 0.5kb downstream 500 false Chr06: 11317529-11318028 Glycine max
Glyma.06G138600 1.0kb upstream 1.0kb upstream 2043 true Chr06: 11318029-11320071 Glycine max
Glyma.06G138600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11319072-11320071 Glycine max
Glyma.06G138600 1.0kb downstream 1.0kb downstream 2043 true Chr06: 11317029-11319071 Glycine max
Glyma.06G138600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11317029-11318028 Glycine max
Glyma.06G138600 2.0kb upstream 2.0kb upstream 3043 true Chr06: 11318029-11321071 Glycine max
Glyma.06G138600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11319072-11321071 Glycine max
Glyma.06G138600 2.0kb downstream 2.0kb downstream 3043 true Chr06: 11316029-11319071 Glycine max
Glyma.06G138600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11316029-11318028 Glycine max
Glyma.06G138600 5.0kb upstream 5.0kb upstream 6043 true Chr06: 11318029-11324071 Glycine max
Glyma.06G138600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11319072-11324071 Glycine max
Glyma.06G138600 5.0kb downstream 5.0kb downstream 6043 true Chr06: 11313029-11319071 Glycine max
Glyma.06G138600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11313029-11318028 Glycine max
Glyma.06G138600 10.0kb upstream 10.0kb upstream 11043 true Chr06: 11318029-11329071 Glycine max
Glyma.06G138600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11319072-11329071 Glycine max
Glyma.06G138600 10.0kb downstream 10.0kb downstream 11043 true Chr06: 11308029-11319071 Glycine max
Glyma.06G138600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11308029-11318028 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311013 5265 Fabidae View MSA
124074174 5270 Rosid View MSA
123746970 5271 Pentapetalae View MSA
122791041 5272 Eudicot View MSA
122049178 5273 Angiosperm View MSA
121350412 5274 Embryophyte View MSA
123424125 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.2883 0.0 107.497 High  
cufflinks 71.1426 0.0 192.458 High  
cufflinks 27.395 0.0 73.8374 High Low
cufflinks 31.4436 0.0 84.249 High Low
cufflinks 116.686 0.0 330.996 High High
cufflinks 117.443 0.0 331.631 High High
cufflinks 94.563 0.0 261.376 High  
cufflinks 69.218 0.0 187.159 High  
cufflinks 71.2442 0.0 192.93 High  
cufflinks 53.005     High  
cufflinks 9.942     High Low
cufflinks 29.439     High  
cufflinks 134.268     High High
cufflinks 194.671     High High
cufflinks 9.221     High Low
cufflinks 42.169     High  
cufflinks 30.217     High  
cufflinks 27.687     High  
cufflinks 56.46     High  
cufflinks 25.864     High  
cufflinks 19.157     High  
cufflinks 28.972     High  
cufflinks 52.916     High  
cufflinks 14.605     High Low
cufflinks 36.745     High  
cufflinks 28.099     High  

0 Strain