Gene : Glyma.06G141300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18937//PTHR18937:SF278 - STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER Genomic Order:  1413
Name:  ? Glyma.06G141300 Secondary Identifier:  ? PAC:30552326
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G141300 0.5kb upstream 0.5kb upstream 4226 true Chr06: 11519169-11523394 Glycine max
Glyma.06G141300 0.5kb upstream 0.5kb upstream 500 false Chr06: 11519169-11519668 Glycine max
Glyma.06G141300 0.5kb downstream 0.5kb downstream 4226 true Chr06: 11519669-11523894 Glycine max
Glyma.06G141300 0.5kb downstream 0.5kb downstream 500 false Chr06: 11523395-11523894 Glycine max
Glyma.06G141300 1.0kb upstream 1.0kb upstream 4726 true Chr06: 11518669-11523394 Glycine max
Glyma.06G141300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11518669-11519668 Glycine max
Glyma.06G141300 1.0kb downstream 1.0kb downstream 4726 true Chr06: 11519669-11524394 Glycine max
Glyma.06G141300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11523395-11524394 Glycine max
Glyma.06G141300 2.0kb upstream 2.0kb upstream 5726 true Chr06: 11517669-11523394 Glycine max
Glyma.06G141300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11517669-11519668 Glycine max
Glyma.06G141300 2.0kb downstream 2.0kb downstream 5726 true Chr06: 11519669-11525394 Glycine max
Glyma.06G141300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11523395-11525394 Glycine max
Glyma.06G141300 5.0kb upstream 5.0kb upstream 8726 true Chr06: 11514669-11523394 Glycine max
Glyma.06G141300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11514669-11519668 Glycine max
Glyma.06G141300 5.0kb downstream 5.0kb downstream 8726 true Chr06: 11519669-11528394 Glycine max
Glyma.06G141300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11523395-11528394 Glycine max
Glyma.06G141300 10.0kb upstream 10.0kb upstream 13726 true Chr06: 11509669-11523394 Glycine max
Glyma.06G141300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11509669-11519668 Glycine max
Glyma.06G141300 10.0kb downstream 10.0kb downstream 13726 true Chr06: 11519669-11533394 Glycine max
Glyma.06G141300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11523395-11533394 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302281 5265 Fabidae View MSA
124074550 5270 Rosid View MSA
123746032 5271 Pentapetalae View MSA
122788667 5272 Eudicot View MSA
122048617 5273 Angiosperm View MSA
121311040 5274 Embryophyte View MSA
123348394 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.91245 0.0 6.10807   Low
cufflinks 8.26663 0.0 22.3497    
cufflinks 3.6693 0.0 10.641    
cufflinks 5.60475 0.0 15.5422    
cufflinks 11.6356 0.0 31.0991    
cufflinks 13.1022 0.0 34.9629   High
cufflinks 5.61893 0.0 15.6631    
cufflinks 8.6611 0.0 23.3372    
cufflinks 9.4398 0.0 25.3766    
cufflinks 7.218        
cufflinks 3.329        
cufflinks 4.469        
cufflinks 11.205     High High
cufflinks 13.702     High High
cufflinks 0.96       Low
cufflinks 2.629        
cufflinks 2.183        
cufflinks 4.202        
cufflinks 6.058        
cufflinks 2.036       Low
cufflinks 4.826        
cufflinks 2.61        
cufflinks 4.697        
cufflinks 5.408        
cufflinks 2.307        
cufflinks 3.851        

0 Strain