Gene : Glyma.06G142300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR26402:SF521 - TWO-COMPONENT RESPONSE REGULATOR ARR16-RELATED Genomic Order:  1423
Name:  ? Glyma.06G142300 Secondary Identifier:  ? PAC:30552557
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G142300 0.5kb upstream 0.5kb upstream 2826 true Chr06: 11584108-11586933 Glycine max
Glyma.06G142300 0.5kb upstream 0.5kb upstream 500 false Chr06: 11586434-11586933 Glycine max
Glyma.06G142300 0.5kb downstream 0.5kb downstream 2826 true Chr06: 11583608-11586433 Glycine max
Glyma.06G142300 0.5kb downstream 0.5kb downstream 500 false Chr06: 11583608-11584107 Glycine max
Glyma.06G142300 1.0kb upstream 1.0kb upstream 3326 true Chr06: 11584108-11587433 Glycine max
Glyma.06G142300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11586434-11587433 Glycine max
Glyma.06G142300 1.0kb downstream 1.0kb downstream 3326 true Chr06: 11583108-11586433 Glycine max
Glyma.06G142300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11583108-11584107 Glycine max
Glyma.06G142300 2.0kb upstream 2.0kb upstream 4326 true Chr06: 11584108-11588433 Glycine max
Glyma.06G142300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11586434-11588433 Glycine max
Glyma.06G142300 2.0kb downstream 2.0kb downstream 4326 true Chr06: 11582108-11586433 Glycine max
Glyma.06G142300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11582108-11584107 Glycine max
Glyma.06G142300 5.0kb upstream 5.0kb upstream 7326 true Chr06: 11584108-11591433 Glycine max
Glyma.06G142300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11586434-11591433 Glycine max
Glyma.06G142300 5.0kb downstream 5.0kb downstream 7326 true Chr06: 11579108-11586433 Glycine max
Glyma.06G142300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11579108-11584107 Glycine max
Glyma.06G142300 10.0kb upstream 10.0kb upstream 12326 true Chr06: 11584108-11596433 Glycine max
Glyma.06G142300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11586434-11596433 Glycine max
Glyma.06G142300 10.0kb downstream 10.0kb downstream 12326 true Chr06: 11574108-11586433 Glycine max
Glyma.06G142300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11574108-11584107 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243660 5265 Fabidae Singleton cluster - no MSA
124062080 5270 Rosid View MSA
123748366 5271 Pentapetalae View MSA
122792334 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.540043 0.0 2.04601    
cufflinks 6.93306 0.0 20.8392    
cufflinks 27.5323 0.0 73.5231 High High
cufflinks 3.0478 0.0 10.2341    
cufflinks 0.30723 0.0 1.19335   Low
cufflinks 1.26503 0.0 4.59191    
cufflinks 14.7157 0.0 40.6584   High
cufflinks 0.110014 0.0 0.443803 Low Low
cufflinks 2.83574 0.0 9.62822    
cufflinks 0.119       Low
cufflinks 0.377        
cufflinks 9.155     High High
cufflinks 0.398        
cufflinks 0.963        
cufflinks 0.992        
cufflinks 2.198        
cufflinks 0.038     Low Low
cufflinks 1.857        
cufflinks 4.46       High
cufflinks 1.557        
cufflinks 0.446        
cufflinks 2.076        
cufflinks 3.165        
cufflinks 0.297        
cufflinks 2.281        
cufflinks 0.211        

0 Strain