Gene : Glyma.06G143100 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR14155//PTHR14155:SF106 - RING FINGER DOMAIN-CONTAINING Genomic Order:  1431
Name:  ? Glyma.06G143100 Secondary Identifier:  ? PAC:30551413
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G143100 0.5kb upstream 0.5kb upstream 2359 true Chr06: 11646751-11649109 Glycine max
Glyma.06G143100 0.5kb upstream 0.5kb upstream 500 false Chr06: 11648610-11649109 Glycine max
Glyma.06G143100 0.5kb downstream 0.5kb downstream 2359 true Chr06: 11646251-11648609 Glycine max
Glyma.06G143100 0.5kb downstream 0.5kb downstream 500 false Chr06: 11646251-11646750 Glycine max
Glyma.06G143100 1.0kb upstream 1.0kb upstream 2859 true Chr06: 11646751-11649609 Glycine max
Glyma.06G143100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11648610-11649609 Glycine max
Glyma.06G143100 1.0kb downstream 1.0kb downstream 2859 true Chr06: 11645751-11648609 Glycine max
Glyma.06G143100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11645751-11646750 Glycine max
Glyma.06G143100 2.0kb upstream 2.0kb upstream 3859 true Chr06: 11646751-11650609 Glycine max
Glyma.06G143100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11648610-11650609 Glycine max
Glyma.06G143100 2.0kb downstream 2.0kb downstream 3859 true Chr06: 11644751-11648609 Glycine max
Glyma.06G143100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11644751-11646750 Glycine max
Glyma.06G143100 5.0kb upstream 5.0kb upstream 6859 true Chr06: 11646751-11653609 Glycine max
Glyma.06G143100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11648610-11653609 Glycine max
Glyma.06G143100 5.0kb downstream 5.0kb downstream 6859 true Chr06: 11641751-11648609 Glycine max
Glyma.06G143100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11641751-11646750 Glycine max
Glyma.06G143100 10.0kb upstream 10.0kb upstream 11859 true Chr06: 11646751-11658609 Glycine max
Glyma.06G143100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11648610-11658609 Glycine max
Glyma.06G143100 10.0kb downstream 10.0kb downstream 11859 true Chr06: 11636751-11648609 Glycine max
Glyma.06G143100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11636751-11646750 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311003 5265 Fabidae View MSA
124069529 5270 Rosid View MSA
123753111 5271 Pentapetalae View MSA
122797850 5272 Eudicot View MSA
122051603 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121351603 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.28086 0.0 25.4847   High
cufflinks 3.13163 0.0 14.142    
cufflinks 4.61929 0.0 18.6678    
cufflinks 6.14196 0.0 22.6259    
cufflinks 0.585092 0.0 3.79432    
cufflinks 0.206316 0.0 1.01176 Low Low
cufflinks 1.86686 0.0 10.1144    
cufflinks 3.98135 0.0 17.4184    
cufflinks 0.757003 0.0 3.39571    
cufflinks 0.384        
cufflinks 0.056        
cufflinks 2.372        
cufflinks 0.043     Low  
cufflinks 0.005     Low Low
cufflinks 0.05     Low  
cufflinks 2.079        
cufflinks 0.005     Low Low
cufflinks 2.865       High
cufflinks 0.924        
cufflinks 2.657        
cufflinks 0.102        
cufflinks 3.789       High
cufflinks 2.201        
cufflinks 0.092        
cufflinks 3.012       High
cufflinks 0.03     Low  

0 Strain