Gene : Glyma.06G143300 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR31867:SF22 - EXPANSIN-A8 Genomic Order:  1433
Name:  ? Glyma.06G143300 Secondary Identifier:  ? PAC:30553740
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G143300 0.5kb upstream 0.5kb upstream 2425 true Chr06: 11661923-11664347 Glycine max
Glyma.06G143300 0.5kb upstream 0.5kb upstream 500 false Chr06: 11661923-11662422 Glycine max
Glyma.06G143300 0.5kb downstream 0.5kb downstream 2425 true Chr06: 11662423-11664847 Glycine max
Glyma.06G143300 0.5kb downstream 0.5kb downstream 500 false Chr06: 11664348-11664847 Glycine max
Glyma.06G143300 1.0kb upstream 1.0kb upstream 2925 true Chr06: 11661423-11664347 Glycine max
Glyma.06G143300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11661423-11662422 Glycine max
Glyma.06G143300 1.0kb downstream 1.0kb downstream 2925 true Chr06: 11662423-11665347 Glycine max
Glyma.06G143300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11664348-11665347 Glycine max
Glyma.06G143300 2.0kb upstream 2.0kb upstream 3925 true Chr06: 11660423-11664347 Glycine max
Glyma.06G143300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11660423-11662422 Glycine max
Glyma.06G143300 2.0kb downstream 2.0kb downstream 3925 true Chr06: 11662423-11666347 Glycine max
Glyma.06G143300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11664348-11666347 Glycine max
Glyma.06G143300 5.0kb upstream 5.0kb upstream 6925 true Chr06: 11657423-11664347 Glycine max
Glyma.06G143300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11657423-11662422 Glycine max
Glyma.06G143300 5.0kb downstream 5.0kb downstream 6925 true Chr06: 11662423-11669347 Glycine max
Glyma.06G143300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11664348-11669347 Glycine max
Glyma.06G143300 10.0kb upstream 10.0kb upstream 11925 true Chr06: 11652423-11664347 Glycine max
Glyma.06G143300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11652423-11662422 Glycine max
Glyma.06G143300 10.0kb downstream 10.0kb downstream 11925 true Chr06: 11662423-11674347 Glycine max
Glyma.06G143300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11664348-11674347 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310468 5265 Fabidae View MSA
124070861 5270 Rosid View MSA
123753539 5271 Pentapetalae View MSA
122795213 5272 Eudicot View MSA
122043079 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121351680 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.6286 0.0 42.2882    
cufflinks 14.4093 0.0 39.1886    
cufflinks 9.22648 0.0 25.9735    
cufflinks 161.111 0.0 513.655 High High
cufflinks 29.3018 0.0 78.2141 High  
cufflinks 21.6459 0.0 57.8665    
cufflinks 3.03671 0.0 9.92529   Low
cufflinks 97.9636 0.0 287.7 High High
cufflinks 73.7603 0.0 208.327 High  
cufflinks 4.242        
cufflinks 0.039     Low Low
cufflinks 7.165        
cufflinks 17.031     High  
cufflinks 19.458     High  
cufflinks 3.349        
cufflinks 12.151     High  
cufflinks 0.192       Low
cufflinks 30.426     High  
cufflinks 18.236     High  
cufflinks 12.623     High  
cufflinks 0.033     Low Low
cufflinks 15.818     High  
cufflinks 26.66     High  
cufflinks 0.087       Low
cufflinks 17.147     High  
cufflinks 0.085       Low

0 Strain