Gene : Glyma.06G143500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23355:SF35 - EXOSOME COMPLEX EXONUCLEASE RRP44 Genomic Order:  1435
Name:  ? Glyma.06G143500 Secondary Identifier:  ? PAC:30553274
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G143500 0.5kb upstream 0.5kb upstream 22248 true Chr06: 11676707-11698954 Glycine max
Glyma.06G143500 0.5kb upstream 0.5kb upstream 500 false Chr06: 11676707-11677206 Glycine max
Glyma.06G143500 0.5kb downstream 0.5kb downstream 22248 true Chr06: 11677207-11699454 Glycine max
Glyma.06G143500 0.5kb downstream 0.5kb downstream 500 false Chr06: 11698955-11699454 Glycine max
Glyma.06G143500 1.0kb upstream 1.0kb upstream 22748 true Chr06: 11676207-11698954 Glycine max
Glyma.06G143500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11676207-11677206 Glycine max
Glyma.06G143500 1.0kb downstream 1.0kb downstream 22748 true Chr06: 11677207-11699954 Glycine max
Glyma.06G143500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11698955-11699954 Glycine max
Glyma.06G143500 2.0kb upstream 2.0kb upstream 23748 true Chr06: 11675207-11698954 Glycine max
Glyma.06G143500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11675207-11677206 Glycine max
Glyma.06G143500 2.0kb downstream 2.0kb downstream 23748 true Chr06: 11677207-11700954 Glycine max
Glyma.06G143500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11698955-11700954 Glycine max
Glyma.06G143500 5.0kb upstream 5.0kb upstream 26748 true Chr06: 11672207-11698954 Glycine max
Glyma.06G143500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11672207-11677206 Glycine max
Glyma.06G143500 5.0kb downstream 5.0kb downstream 26748 true Chr06: 11677207-11703954 Glycine max
Glyma.06G143500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11698955-11703954 Glycine max
Glyma.06G143500 10.0kb upstream 10.0kb upstream 31748 true Chr06: 11667207-11698954 Glycine max
Glyma.06G143500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11667207-11677206 Glycine max
Glyma.06G143500 10.0kb downstream 10.0kb downstream 31748 true Chr06: 11677207-11708954 Glycine max
Glyma.06G143500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11698955-11708954 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305027 5265 Fabidae View MSA
124060472 5270 Rosid View MSA
123737473 5271 Pentapetalae View MSA
122790694 5272 Eudicot View MSA
122043257 5273 Angiosperm View MSA
121346198 5274 Embryophyte View MSA
123425296 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.41248 0.0 28.1781    
cufflinks 9.13113 0.0 34.9084    
cufflinks 10.071 0.0 38.6772    
cufflinks 9.36608 0.0 35.5677    
cufflinks 7.65882 0.0 29.3047    
cufflinks 3.27528 0.0 13.782   Low
cufflinks 13.3706 0.0 52.4004   High
cufflinks 8.53636 0.0 32.3499    
cufflinks 7.59069 0.0 28.8726    
cufflinks 0.288        
cufflinks 0.153       Low
cufflinks 0.543       High
cufflinks 0.365        
cufflinks 0.446       High
cufflinks 0.313        
cufflinks 0.247        
cufflinks 0.314        
cufflinks 0.548       High
cufflinks 0.526       High
cufflinks 0.224        
cufflinks 0.208        
cufflinks 0.253        
cufflinks 0.303        
cufflinks 0.171       Low
cufflinks 0.248        
cufflinks 0.229        

0 Strain