Gene : Glyma.06G128500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31707:SF8 - PECTINESTERASE/PECTINESTERASE INHIBITOR 34-RELATED Genomic Order:  1285
Name:  ? Glyma.06G128500 Secondary Identifier:  ? PAC:30552256
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G128500 0.5kb upstream 0.5kb upstream 5169 true Chr06: 10564308-10569476 Glycine max
Glyma.06G128500 0.5kb upstream 0.5kb upstream 500 false Chr06: 10564308-10564807 Glycine max
Glyma.06G128500 0.5kb downstream 0.5kb downstream 5169 true Chr06: 10564808-10569976 Glycine max
Glyma.06G128500 0.5kb downstream 0.5kb downstream 500 false Chr06: 10569477-10569976 Glycine max
Glyma.06G128500 1.0kb upstream 1.0kb upstream 5669 true Chr06: 10563808-10569476 Glycine max
Glyma.06G128500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10563808-10564807 Glycine max
Glyma.06G128500 1.0kb downstream 1.0kb downstream 5669 true Chr06: 10564808-10570476 Glycine max
Glyma.06G128500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10569477-10570476 Glycine max
Glyma.06G128500 2.0kb upstream 2.0kb upstream 6669 true Chr06: 10562808-10569476 Glycine max
Glyma.06G128500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10562808-10564807 Glycine max
Glyma.06G128500 2.0kb downstream 2.0kb downstream 6669 true Chr06: 10564808-10571476 Glycine max
Glyma.06G128500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10569477-10571476 Glycine max
Glyma.06G128500 5.0kb upstream 5.0kb upstream 9669 true Chr06: 10559808-10569476 Glycine max
Glyma.06G128500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10559808-10564807 Glycine max
Glyma.06G128500 5.0kb downstream 5.0kb downstream 9669 true Chr06: 10564808-10574476 Glycine max
Glyma.06G128500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10569477-10574476 Glycine max
Glyma.06G128500 10.0kb upstream 10.0kb upstream 14669 true Chr06: 10554808-10569476 Glycine max
Glyma.06G128500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10554808-10564807 Glycine max
Glyma.06G128500 10.0kb downstream 10.0kb downstream 14669 true Chr06: 10564808-10579476 Glycine max
Glyma.06G128500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10569477-10579476 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310193 5265 Fabidae View MSA
124065220 5270 Rosid View MSA
123746199 5271 Pentapetalae View MSA
122794152 5272 Eudicot View MSA
122043800 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.68282 0.0 10.7376    
cufflinks 7.90348 0.0 21.4861    
cufflinks 1.45901 0.0 4.88206   Low
cufflinks 24.9628 0.0 67.6543 High High
cufflinks 9.06447 0.0 24.3754    
cufflinks 2.38208 0.0 7.36863   Low
cufflinks 9.84302 0.0 26.4179    
cufflinks 21.6308 0.0 58.2023 High High
cufflinks 8.34824 0.0 22.5762    
cufflinks 21.748     High High
cufflinks 5.319        
cufflinks 1.402       Low
cufflinks 2.454        
cufflinks 2.352        
cufflinks 6.244     High  
cufflinks 3.917        
cufflinks 3.688        
cufflinks 3.421        
cufflinks 4.618        
cufflinks 2.708        
cufflinks 5.875     High  
cufflinks 3.508        
cufflinks 5.223        
cufflinks 4.157        
cufflinks 2.856        
cufflinks 3.964        

0 Strain