Gene : Glyma.06G129100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11262:SF11 - ATP-DEPENDENT CLP PROTEASE REGULATORY SUBUNIT CLPX Genomic Order:  1291
Name:  ? Glyma.06G129100 Secondary Identifier:  ? PAC:30549505
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G129100 0.5kb upstream 0.5kb upstream 6084 true Chr06: 10609525-10615608 Glycine max
Glyma.06G129100 0.5kb upstream 0.5kb upstream 500 false Chr06: 10615109-10615608 Glycine max
Glyma.06G129100 0.5kb downstream 0.5kb downstream 6084 true Chr06: 10609025-10615108 Glycine max
Glyma.06G129100 0.5kb downstream 0.5kb downstream 500 false Chr06: 10609025-10609524 Glycine max
Glyma.06G129100 1.0kb upstream 1.0kb upstream 6584 true Chr06: 10609525-10616108 Glycine max
Glyma.06G129100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10615109-10616108 Glycine max
Glyma.06G129100 1.0kb downstream 1.0kb downstream 6584 true Chr06: 10608525-10615108 Glycine max
Glyma.06G129100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10608525-10609524 Glycine max
Glyma.06G129100 2.0kb upstream 2.0kb upstream 7584 true Chr06: 10609525-10617108 Glycine max
Glyma.06G129100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10615109-10617108 Glycine max
Glyma.06G129100 2.0kb downstream 2.0kb downstream 7584 true Chr06: 10607525-10615108 Glycine max
Glyma.06G129100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10607525-10609524 Glycine max
Glyma.06G129100 5.0kb upstream 5.0kb upstream 10584 true Chr06: 10609525-10620108 Glycine max
Glyma.06G129100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10615109-10620108 Glycine max
Glyma.06G129100 5.0kb downstream 5.0kb downstream 10584 true Chr06: 10604525-10615108 Glycine max
Glyma.06G129100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10604525-10609524 Glycine max
Glyma.06G129100 10.0kb upstream 10.0kb upstream 15584 true Chr06: 10609525-10625108 Glycine max
Glyma.06G129100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10615109-10625108 Glycine max
Glyma.06G129100 10.0kb downstream 10.0kb downstream 15584 true Chr06: 10599525-10615108 Glycine max
Glyma.06G129100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10599525-10609524 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308819 5265 Fabidae View MSA
124065243 5270 Rosid View MSA
123749769 5271 Pentapetalae View MSA
122790976 5272 Eudicot View MSA
122041595 5273 Angiosperm View MSA
121347739 5274 Embryophyte View MSA
123427798 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.5218 0.0 102.364 High High
cufflinks 11.042 0.0 29.5577    
cufflinks 78.6122 0.0 246.585 High High
cufflinks 12.7409 0.0 34.0092    
cufflinks 8.73224 0.0 23.573    
cufflinks 13.995 0.0 37.3368    
cufflinks 11.6448 0.0 31.1274    
cufflinks 17.239 0.0 46.0765    
cufflinks 13.4971 0.0 36.0126    
cufflinks 3.533        
cufflinks 6.363     High  
cufflinks 16.254     High High
cufflinks 2.902       Low
cufflinks 2.243       Low
cufflinks 7.29     High  
cufflinks 5.301        
cufflinks 4.043        
cufflinks 6.381        
cufflinks 4.85        
cufflinks 7.515     High  
cufflinks 5.462        
cufflinks 7.271     High  
cufflinks 4.679        
cufflinks 7.647     High  
cufflinks 6.359        
cufflinks 4.774        

0 Strain