Gene : Glyma.06G133600 G. max Wm82.a2.v1
Defline:  (1 of 5) KOG0003 - Ubiquitin/60s ribosomal protein L40 fusion Genomic Order:  1336
Name:  ? Glyma.06G133600 Secondary Identifier:  ? PAC:30551009
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G133600 0.5kb upstream 0.5kb upstream 3216 true Chr06: 10992266-10995481 Glycine max
Glyma.06G133600 0.5kb upstream 0.5kb upstream 500 false Chr06: 10992266-10992765 Glycine max
Glyma.06G133600 0.5kb downstream 0.5kb downstream 3216 true Chr06: 10992766-10995981 Glycine max
Glyma.06G133600 0.5kb downstream 0.5kb downstream 500 false Chr06: 10995482-10995981 Glycine max
Glyma.06G133600 1.0kb upstream 1.0kb upstream 3716 true Chr06: 10991766-10995481 Glycine max
Glyma.06G133600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10991766-10992765 Glycine max
Glyma.06G133600 1.0kb downstream 1.0kb downstream 3716 true Chr06: 10992766-10996481 Glycine max
Glyma.06G133600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10995482-10996481 Glycine max
Glyma.06G133600 2.0kb upstream 2.0kb upstream 4716 true Chr06: 10990766-10995481 Glycine max
Glyma.06G133600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10990766-10992765 Glycine max
Glyma.06G133600 2.0kb downstream 2.0kb downstream 4716 true Chr06: 10992766-10997481 Glycine max
Glyma.06G133600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10995482-10997481 Glycine max
Glyma.06G133600 5.0kb upstream 5.0kb upstream 7716 true Chr06: 10987766-10995481 Glycine max
Glyma.06G133600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10987766-10992765 Glycine max
Glyma.06G133600 5.0kb downstream 5.0kb downstream 7716 true Chr06: 10992766-11000481 Glycine max
Glyma.06G133600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10995482-11000481 Glycine max
Glyma.06G133600 10.0kb upstream 10.0kb upstream 12716 true Chr06: 10982766-10995481 Glycine max
Glyma.06G133600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10982766-10992765 Glycine max
Glyma.06G133600 10.0kb downstream 10.0kb downstream 12716 true Chr06: 10992766-11005481 Glycine max
Glyma.06G133600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10995482-11005481 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314502 5265 Fabidae View MSA
124071470 5270 Rosid View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.295 0.0 155.887 High Low
cufflinks 72.6614 0.0 281.32 High  
cufflinks 32.1675 0.0 95.3741 High Low
cufflinks 50.8985 0.0 187.795 High  
cufflinks 114.213 0.0 460.012 High High
cufflinks 133.343 0.0 558.515 High High
cufflinks 90.7878 0.0 298.916 High  
cufflinks 72.534 0.0 274.954 High  
cufflinks 79.3031 0.0 253.073 High  
cufflinks 12.116     High  
cufflinks 4.499        
cufflinks 6.606        
cufflinks 28.052     High High
cufflinks 39.702     High High
cufflinks 3.523       Low
cufflinks 7.298     High  
cufflinks 8.318     High  
cufflinks 9.108     High  
cufflinks 11.504     High  
cufflinks 4.875        
cufflinks 6.543     High  
cufflinks 5.594        
cufflinks 10.234     High  
cufflinks 5.325        
cufflinks 6.405        
cufflinks 8.047     High  

0 Strain