Gene : Glyma.06G122800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11802//PTHR11802:SF20 - SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE Genomic Order:  1228
Name:  ? Glyma.06G122800 Secondary Identifier:  ? PAC:30553409
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G122800 0.5kb upstream 0.5kb upstream 4554 true Chr06: 10009186-10013739 Glycine max
Glyma.06G122800 0.5kb upstream 0.5kb upstream 500 false Chr06: 10013240-10013739 Glycine max
Glyma.06G122800 0.5kb downstream 0.5kb downstream 4554 true Chr06: 10008686-10013239 Glycine max
Glyma.06G122800 0.5kb downstream 0.5kb downstream 500 false Chr06: 10008686-10009185 Glycine max
Glyma.06G122800 1.0kb upstream 1.0kb upstream 5054 true Chr06: 10009186-10014239 Glycine max
Glyma.06G122800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10013240-10014239 Glycine max
Glyma.06G122800 1.0kb downstream 1.0kb downstream 5054 true Chr06: 10008186-10013239 Glycine max
Glyma.06G122800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10008186-10009185 Glycine max
Glyma.06G122800 2.0kb upstream 2.0kb upstream 6054 true Chr06: 10009186-10015239 Glycine max
Glyma.06G122800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10013240-10015239 Glycine max
Glyma.06G122800 2.0kb downstream 2.0kb downstream 6054 true Chr06: 10007186-10013239 Glycine max
Glyma.06G122800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10007186-10009185 Glycine max
Glyma.06G122800 5.0kb upstream 5.0kb upstream 9054 true Chr06: 10009186-10018239 Glycine max
Glyma.06G122800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10013240-10018239 Glycine max
Glyma.06G122800 5.0kb downstream 5.0kb downstream 9054 true Chr06: 10004186-10013239 Glycine max
Glyma.06G122800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10004186-10009185 Glycine max
Glyma.06G122800 10.0kb upstream 10.0kb upstream 14054 true Chr06: 10009186-10023239 Glycine max
Glyma.06G122800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10013240-10023239 Glycine max
Glyma.06G122800 10.0kb downstream 10.0kb downstream 14054 true Chr06: 9999186-10013239 Glycine max
Glyma.06G122800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9999186-10009185 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310905 5265 Fabidae View MSA
124061413 5270 Rosid View MSA
123737952 5271 Pentapetalae View MSA
122791491 5272 Eudicot View MSA
122043115 5273 Angiosperm View MSA
121351274 5274 Embryophyte View MSA
123428424 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.10224 0.0 20.4299    
cufflinks 0.453875 0.0 2.15937   Low
cufflinks 8.24212 0.0 37.7966   High
cufflinks 0.130687 0.0 0.510328 Low Low
cufflinks 2.64694 0.0 11.0453    
cufflinks 1.99592 0.0 11.1705    
cufflinks 3.19362 0.0 15.1353    
cufflinks 1.79178 0.0 10.5517    
cufflinks 5.66618 0.0 23.0493    
cufflinks 0.097     Low  
cufflinks 0.864       High
cufflinks 0.325        
cufflinks 0.432        
cufflinks 0.515        
cufflinks 0.291        
cufflinks 0.043     Low Low
cufflinks 0.276        
cufflinks 0.039     Low Low
cufflinks 0.056     Low  
cufflinks 0.029     Low Low
cufflinks 0.423        
cufflinks 0.055     Low  
cufflinks 0.065     Low  
cufflinks 0.967       High
cufflinks 0.043     Low Low
cufflinks 0.276        

0 Strain