Gene : Glyma.06G125100 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  1251
Name:  ? Glyma.06G125100 Secondary Identifier:  ? PAC:30549588
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G125100 0.5kb upstream 0.5kb upstream 2894 true Chr06: 10189969-10192862 Glycine max
Glyma.06G125100 0.5kb upstream 0.5kb upstream 500 false Chr06: 10189969-10190468 Glycine max
Glyma.06G125100 0.5kb downstream 0.5kb downstream 2894 true Chr06: 10190469-10193362 Glycine max
Glyma.06G125100 0.5kb downstream 0.5kb downstream 500 false Chr06: 10192863-10193362 Glycine max
Glyma.06G125100 1.0kb upstream 1.0kb upstream 3394 true Chr06: 10189469-10192862 Glycine max
Glyma.06G125100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10189469-10190468 Glycine max
Glyma.06G125100 1.0kb downstream 1.0kb downstream 3394 true Chr06: 10190469-10193862 Glycine max
Glyma.06G125100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10192863-10193862 Glycine max
Glyma.06G125100 2.0kb upstream 2.0kb upstream 4394 true Chr06: 10188469-10192862 Glycine max
Glyma.06G125100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10188469-10190468 Glycine max
Glyma.06G125100 2.0kb downstream 2.0kb downstream 4394 true Chr06: 10190469-10194862 Glycine max
Glyma.06G125100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10192863-10194862 Glycine max
Glyma.06G125100 5.0kb upstream 5.0kb upstream 7394 true Chr06: 10185469-10192862 Glycine max
Glyma.06G125100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10185469-10190468 Glycine max
Glyma.06G125100 5.0kb downstream 5.0kb downstream 7394 true Chr06: 10190469-10197862 Glycine max
Glyma.06G125100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10192863-10197862 Glycine max
Glyma.06G125100 10.0kb upstream 10.0kb upstream 12394 true Chr06: 10180469-10192862 Glycine max
Glyma.06G125100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10180469-10190468 Glycine max
Glyma.06G125100 10.0kb downstream 10.0kb downstream 12394 true Chr06: 10190469-10202862 Glycine max
Glyma.06G125100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10192863-10202862 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300059 5265 Fabidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.097257 0.0 0.383667 Low Low
cufflinks 2.48931 0.0 7.82222    
cufflinks 0.589304 0.0 2.15011    
cufflinks 0.489724 0.0 1.80097    
cufflinks 6.80151 0.0 18.7345   High
cufflinks 2.75922 0.0 8.49054    
cufflinks 0.103688 0.0 0.408051 Low Low
cufflinks 1.08885 0.0 3.78766    
cufflinks 1.17674 0.0 4.05417    
cufflinks 4.501       High
cufflinks 0.399        
cufflinks 1.464        
cufflinks 4.431       High
cufflinks 7.234     High High
cufflinks 0.072       Low
cufflinks 0.279        
cufflinks 17.779     High High
cufflinks 1.11        
cufflinks 2.811        
cufflinks 0.153       Low
cufflinks 0.37        
cufflinks 0.105       Low
cufflinks 0.566        
cufflinks 0.358        
cufflinks 0.175        
cufflinks 0.883        

0 Strain