Gene : Glyma.06G126000 G. max Wm82.a2.v1
Defline:  (1 of 1) PF00076//PF01434//PF07728//PF13893 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // Peptidase family M41 (Peptidase_M41) // AAA domain (dynein-related subfamily) (AAA_5) // RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_5) Genomic Order:  1260
Name:  ? Glyma.06G126000 Secondary Identifier:  ? PAC:30553448
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G126000 0.5kb upstream 0.5kb upstream 20867 true Chr06: 10293011-10313877 Glycine max
Glyma.06G126000 0.5kb upstream 0.5kb upstream 500 false Chr06: 10293011-10293510 Glycine max
Glyma.06G126000 0.5kb downstream 0.5kb downstream 20867 true Chr06: 10293511-10314377 Glycine max
Glyma.06G126000 0.5kb downstream 0.5kb downstream 500 false Chr06: 10313878-10314377 Glycine max
Glyma.06G126000 1.0kb upstream 1.0kb upstream 21367 true Chr06: 10292511-10313877 Glycine max
Glyma.06G126000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10292511-10293510 Glycine max
Glyma.06G126000 1.0kb downstream 1.0kb downstream 21367 true Chr06: 10293511-10314877 Glycine max
Glyma.06G126000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10313878-10314877 Glycine max
Glyma.06G126000 2.0kb upstream 2.0kb upstream 22367 true Chr06: 10291511-10313877 Glycine max
Glyma.06G126000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10291511-10293510 Glycine max
Glyma.06G126000 2.0kb downstream 2.0kb downstream 22367 true Chr06: 10293511-10315877 Glycine max
Glyma.06G126000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10313878-10315877 Glycine max
Glyma.06G126000 5.0kb upstream 5.0kb upstream 25367 true Chr06: 10288511-10313877 Glycine max
Glyma.06G126000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10288511-10293510 Glycine max
Glyma.06G126000 5.0kb downstream 5.0kb downstream 25367 true Chr06: 10293511-10318877 Glycine max
Glyma.06G126000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10313878-10318877 Glycine max
Glyma.06G126000 10.0kb upstream 10.0kb upstream 30367 true Chr06: 10283511-10313877 Glycine max
Glyma.06G126000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10283511-10293510 Glycine max
Glyma.06G126000 10.0kb downstream 10.0kb downstream 30367 true Chr06: 10293511-10323877 Glycine max
Glyma.06G126000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10313878-10323877 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243544 5265 Fabidae Singleton cluster - no MSA
124037549 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.63214 0.0 30.0026   High
cufflinks 5.01406 0.0 17.6678    
cufflinks 7.87104 0.0 27.0374   High
cufflinks 3.39478 0.0 10.7825    
cufflinks 2.59184 0.0 8.71784   Low
cufflinks 2.41828 0.0 8.23331   Low
cufflinks 4.3974 0.0 15.7692    
cufflinks 3.73915 0.0 13.5288    
cufflinks 2.84994 0.0 9.31858    
cufflinks 0.636        
cufflinks 0.512        
cufflinks 0.979        
cufflinks 0.38        
cufflinks 0.314       Low
cufflinks 0.365       Low
cufflinks 1.955       High
cufflinks 0.364       Low
cufflinks 0.842        
cufflinks 0.851        
cufflinks 2.513       High
cufflinks 0.454        
cufflinks 2.389       High
cufflinks 1.51        
cufflinks 0.594        
cufflinks 2.285       High
cufflinks 0.415        

0 Strain