Gene : Glyma.06G126300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10788//PTHR10788:SF39 - TREHALOSE-6-PHOSPHATE SYNTHASE Genomic Order:  1263
Name:  ? Glyma.06G126300 Secondary Identifier:  ? PAC:30552612
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G126300 0.5kb upstream 0.5kb upstream 10441 true Chr06: 10331312-10341752 Glycine max
Glyma.06G126300 0.5kb upstream 0.5kb upstream 500 false Chr06: 10341253-10341752 Glycine max
Glyma.06G126300 0.5kb downstream 0.5kb downstream 10441 true Chr06: 10330812-10341252 Glycine max
Glyma.06G126300 0.5kb downstream 0.5kb downstream 500 false Chr06: 10330812-10331311 Glycine max
Glyma.06G126300 1.0kb upstream 1.0kb upstream 10941 true Chr06: 10331312-10342252 Glycine max
Glyma.06G126300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10341253-10342252 Glycine max
Glyma.06G126300 1.0kb downstream 1.0kb downstream 10941 true Chr06: 10330312-10341252 Glycine max
Glyma.06G126300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10330312-10331311 Glycine max
Glyma.06G126300 2.0kb upstream 2.0kb upstream 11941 true Chr06: 10331312-10343252 Glycine max
Glyma.06G126300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10341253-10343252 Glycine max
Glyma.06G126300 2.0kb downstream 2.0kb downstream 11941 true Chr06: 10329312-10341252 Glycine max
Glyma.06G126300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10329312-10331311 Glycine max
Glyma.06G126300 5.0kb upstream 5.0kb upstream 14941 true Chr06: 10331312-10346252 Glycine max
Glyma.06G126300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10341253-10346252 Glycine max
Glyma.06G126300 5.0kb downstream 5.0kb downstream 14941 true Chr06: 10326312-10341252 Glycine max
Glyma.06G126300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10326312-10331311 Glycine max
Glyma.06G126300 10.0kb upstream 10.0kb upstream 19941 true Chr06: 10331312-10351252 Glycine max
Glyma.06G126300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10341253-10351252 Glycine max
Glyma.06G126300 10.0kb downstream 10.0kb downstream 19941 true Chr06: 10321312-10341252 Glycine max
Glyma.06G126300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10321312-10331311 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303383 5265 Fabidae View MSA
124071032 5270 Rosid View MSA
123748006 5271 Pentapetalae View MSA
122793919 5272 Eudicot View MSA
122048868 5273 Angiosperm View MSA
121311146 5274 Embryophyte View MSA
123427869 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.569722 0.0 2.10733    
cufflinks 0.506415 0.0 1.88331    
cufflinks 0.234009 0.0 0.899807   Low
cufflinks 0.251704 0.0 0.96558    
cufflinks 2.11611 0.0 7.0495   High
cufflinks 1.1558 0.0 4.08502   High
cufflinks 0.327184 0.0 1.24246    
cufflinks 0.348903 0.0 1.31995    
cufflinks 0.529195 0.0 1.96401    
cufflinks 0.077     Low Low
cufflinks 0.145        
cufflinks 0.062     Low Low
cufflinks 0.508       High
cufflinks 0.616       High
cufflinks 0.618       High
cufflinks 0.121        
cufflinks 0.067     Low Low
cufflinks 0.199        
cufflinks 0.112        
cufflinks 0.105        
cufflinks 0.189        
cufflinks 0.144        
cufflinks 0.11        
cufflinks 0.136        
cufflinks 0.129        
cufflinks 0.53       High

0 Strain