Gene : Glyma.06G127200 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG4519 - Phosphomevalonate kinase Genomic Order:  1272
Name:  ? Glyma.06G127200 Secondary Identifier:  ? PAC:30553138
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5910 Glycine max pathologic  
Gmax PWY-922 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G127200 0.5kb upstream 0.5kb upstream 6784 true Chr06: 10423873-10430656 Glycine max
Glyma.06G127200 0.5kb upstream 0.5kb upstream 500 false Chr06: 10430157-10430656 Glycine max
Glyma.06G127200 0.5kb downstream 0.5kb downstream 6784 true Chr06: 10423373-10430156 Glycine max
Glyma.06G127200 0.5kb downstream 0.5kb downstream 500 false Chr06: 10423373-10423872 Glycine max
Glyma.06G127200 1.0kb upstream 1.0kb upstream 7284 true Chr06: 10423873-10431156 Glycine max
Glyma.06G127200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10430157-10431156 Glycine max
Glyma.06G127200 1.0kb downstream 1.0kb downstream 7284 true Chr06: 10422873-10430156 Glycine max
Glyma.06G127200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10422873-10423872 Glycine max
Glyma.06G127200 2.0kb upstream 2.0kb upstream 8284 true Chr06: 10423873-10432156 Glycine max
Glyma.06G127200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10430157-10432156 Glycine max
Glyma.06G127200 2.0kb downstream 2.0kb downstream 8284 true Chr06: 10421873-10430156 Glycine max
Glyma.06G127200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10421873-10423872 Glycine max
Glyma.06G127200 5.0kb upstream 5.0kb upstream 11284 true Chr06: 10423873-10435156 Glycine max
Glyma.06G127200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10430157-10435156 Glycine max
Glyma.06G127200 5.0kb downstream 5.0kb downstream 11284 true Chr06: 10418873-10430156 Glycine max
Glyma.06G127200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10418873-10423872 Glycine max
Glyma.06G127200 10.0kb upstream 10.0kb upstream 16284 true Chr06: 10423873-10440156 Glycine max
Glyma.06G127200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10430157-10440156 Glycine max
Glyma.06G127200 10.0kb downstream 10.0kb downstream 16284 true Chr06: 10413873-10430156 Glycine max
Glyma.06G127200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10413873-10423872 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302119 5265 Fabidae View MSA
124060690 5270 Rosid View MSA
123748529 5271 Pentapetalae View MSA
122787383 5272 Eudicot View MSA
122043495 5273 Angiosperm View MSA
121345412 5274 Embryophyte View MSA
123380212 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.08402 0.0 21.9545   Low
cufflinks 8.56967 0.0 46.4683    
cufflinks 2.41218 0.0 12.5031   Low
cufflinks 7.34435 0.0 33.7735    
cufflinks 11.4238 0.0 46.0752    
cufflinks 7.83812 0.0 26.6956    
cufflinks 9.49947 0.0 40.9965    
cufflinks 7.39748 0.0 29.8114    
cufflinks 8.47555 0.0 36.1982    
cufflinks 1.149        
cufflinks 0.155       Low
cufflinks 1.104        
cufflinks 1.751       High
cufflinks 2.535       High
cufflinks 0.335        
cufflinks 0.775        
cufflinks 0.405        
cufflinks 2.248       High
cufflinks 2.267       High
cufflinks 0.511        
cufflinks 0.314        
cufflinks 0.547        
cufflinks 1.182        
cufflinks 0.19       Low
cufflinks 0.754        
cufflinks 0.466        

0 Strain