Gene : Glyma.06G127400 G. max Wm82.a2.v1
Defline:  (1 of 6) 1.4.1.14 - Glutamate synthase (NADH) / NADH-glutamate synthase Genomic Order:  1274
Name:  ? Glyma.06G127400 Secondary Identifier:  ? PAC:30552818
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUGLNSYN-PWY Glycine max pathologic  
Gmax PWY-3282 Glycine max pathologic  
Gmax PWY-6963 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G127400 0.5kb upstream 0.5kb upstream 13819 true Chr06: 10435277-10449095 Glycine max
Glyma.06G127400 0.5kb upstream 0.5kb upstream 500 false Chr06: 10448596-10449095 Glycine max
Glyma.06G127400 0.5kb downstream 0.5kb downstream 13819 true Chr06: 10434777-10448595 Glycine max
Glyma.06G127400 0.5kb downstream 0.5kb downstream 500 false Chr06: 10434777-10435276 Glycine max
Glyma.06G127400 1.0kb upstream 1.0kb upstream 14319 true Chr06: 10435277-10449595 Glycine max
Glyma.06G127400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10448596-10449595 Glycine max
Glyma.06G127400 1.0kb downstream 1.0kb downstream 14319 true Chr06: 10434277-10448595 Glycine max
Glyma.06G127400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10434277-10435276 Glycine max
Glyma.06G127400 2.0kb upstream 2.0kb upstream 15319 true Chr06: 10435277-10450595 Glycine max
Glyma.06G127400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10448596-10450595 Glycine max
Glyma.06G127400 2.0kb downstream 2.0kb downstream 15319 true Chr06: 10433277-10448595 Glycine max
Glyma.06G127400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10433277-10435276 Glycine max
Glyma.06G127400 5.0kb upstream 5.0kb upstream 18319 true Chr06: 10435277-10453595 Glycine max
Glyma.06G127400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10448596-10453595 Glycine max
Glyma.06G127400 5.0kb downstream 5.0kb downstream 18319 true Chr06: 10430277-10448595 Glycine max
Glyma.06G127400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10430277-10435276 Glycine max
Glyma.06G127400 10.0kb upstream 10.0kb upstream 23319 true Chr06: 10435277-10458595 Glycine max
Glyma.06G127400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10448596-10458595 Glycine max
Glyma.06G127400 10.0kb downstream 10.0kb downstream 23319 true Chr06: 10425277-10448595 Glycine max
Glyma.06G127400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10425277-10435276 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308491 5265 Fabidae View MSA
124067049 5270 Rosid View MSA
123737951 5271 Pentapetalae View MSA
122793648 5272 Eudicot View MSA
122047244 5273 Angiosperm View MSA
121349673 5274 Embryophyte View MSA
123426109 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.75194 0.0 7.37744    
cufflinks 3.96805 0.0 10.5873    
cufflinks 1.55081 0.0 4.29785   Low
cufflinks 14.1951 0.0 41.7261    
cufflinks 17.8244 0.0 54.2644    
cufflinks 2.75584 0.0 7.38638    
cufflinks 19.1034 0.0 58.7442    
cufflinks 16.022 0.0 47.927    
cufflinks 17.3584 0.0 52.5972    
cufflinks 12.365     High  
cufflinks 14.052     High  
cufflinks 4.063        
cufflinks 10.415     High  
cufflinks 14.792     High  
cufflinks 262.872     High High
cufflinks 7.793     High  
cufflinks 4.96        
cufflinks 12.384     High  
cufflinks 7.254        
cufflinks 3.74        
cufflinks 15.746     High  
cufflinks 4.37        
cufflinks 4.468        
cufflinks 7.011     High  
cufflinks 5.413        
cufflinks 9.225     High  

0 Strain