Gene : Glyma.06G128000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12356:SF3 - NUCLEAR MIGRATION PROTEIN NUDC Genomic Order:  1280
Name:  ? Glyma.06G128000 Secondary Identifier:  ? PAC:30551305
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G128000 0.5kb upstream 0.5kb upstream 3199 true Chr06: 10534942-10538140 Glycine max
Glyma.06G128000 0.5kb upstream 0.5kb upstream 500 false Chr06: 10537641-10538140 Glycine max
Glyma.06G128000 0.5kb downstream 0.5kb downstream 3199 true Chr06: 10534442-10537640 Glycine max
Glyma.06G128000 0.5kb downstream 0.5kb downstream 500 false Chr06: 10534442-10534941 Glycine max
Glyma.06G128000 1.0kb upstream 1.0kb upstream 3699 true Chr06: 10534942-10538640 Glycine max
Glyma.06G128000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 10537641-10538640 Glycine max
Glyma.06G128000 1.0kb downstream 1.0kb downstream 3699 true Chr06: 10533942-10537640 Glycine max
Glyma.06G128000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 10533942-10534941 Glycine max
Glyma.06G128000 2.0kb upstream 2.0kb upstream 4699 true Chr06: 10534942-10539640 Glycine max
Glyma.06G128000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 10537641-10539640 Glycine max
Glyma.06G128000 2.0kb downstream 2.0kb downstream 4699 true Chr06: 10532942-10537640 Glycine max
Glyma.06G128000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 10532942-10534941 Glycine max
Glyma.06G128000 5.0kb upstream 5.0kb upstream 7699 true Chr06: 10534942-10542640 Glycine max
Glyma.06G128000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 10537641-10542640 Glycine max
Glyma.06G128000 5.0kb downstream 5.0kb downstream 7699 true Chr06: 10529942-10537640 Glycine max
Glyma.06G128000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 10529942-10534941 Glycine max
Glyma.06G128000 10.0kb upstream 10.0kb upstream 12699 true Chr06: 10534942-10547640 Glycine max
Glyma.06G128000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 10537641-10547640 Glycine max
Glyma.06G128000 10.0kb downstream 10.0kb downstream 12699 true Chr06: 10524942-10537640 Glycine max
Glyma.06G128000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 10524942-10534941 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308608 5265 Fabidae View MSA
124064550 5270 Rosid View MSA
123752804 5271 Pentapetalae View MSA
122796165 5272 Eudicot View MSA
122044213 5273 Angiosperm View MSA
121350395 5274 Embryophyte View MSA
123424343 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1711 0.0 27.8293   Low
cufflinks 23.6511 0.0 63.1515 High  
cufflinks 7.5742 0.0 21.2735   Low
cufflinks 28.9965 0.0 77.8473 High  
cufflinks 29.5283 0.0 79.3487 High  
cufflinks 23.4263 0.0 62.5565 High  
cufflinks 30.3592 0.0 81.5576 High  
cufflinks 22.7015 0.0 60.5977 High  
cufflinks 47.6109 0.0 131.973 High High
cufflinks 10.48     High  
cufflinks 1.902       Low
cufflinks 9.272     High  
cufflinks 17.692     High High
cufflinks 21.611     High High
cufflinks 16.91     High High
cufflinks 5.311        
cufflinks 3.688        
cufflinks 11.61     High  
cufflinks 12.045     High  
cufflinks 5.549        
cufflinks 2.509       Low
cufflinks 5.462        
cufflinks 7.677     High  
cufflinks 1.661       Low
cufflinks 5.075        
cufflinks 3.201        

0 Strain