Gene : Glyma.06G116200 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR32161:SF8 - PROTEIN TAG-10, ISOFORM A Genomic Order:  1162
Name:  ? Glyma.06G116200 Secondary Identifier:  ? PAC:30550887
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G116200 0.5kb upstream 0.5kb upstream 3589 true Chr06: 9453363-9456951 Glycine max
Glyma.06G116200 0.5kb upstream 0.5kb upstream 500 false Chr06: 9456452-9456951 Glycine max
Glyma.06G116200 0.5kb downstream 0.5kb downstream 3589 true Chr06: 9452863-9456451 Glycine max
Glyma.06G116200 0.5kb downstream 0.5kb downstream 500 false Chr06: 9452863-9453362 Glycine max
Glyma.06G116200 1.0kb upstream 1.0kb upstream 4089 true Chr06: 9453363-9457451 Glycine max
Glyma.06G116200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9456452-9457451 Glycine max
Glyma.06G116200 1.0kb downstream 1.0kb downstream 4089 true Chr06: 9452363-9456451 Glycine max
Glyma.06G116200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9452363-9453362 Glycine max
Glyma.06G116200 2.0kb upstream 2.0kb upstream 5089 true Chr06: 9453363-9458451 Glycine max
Glyma.06G116200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9456452-9458451 Glycine max
Glyma.06G116200 2.0kb downstream 2.0kb downstream 5089 true Chr06: 9451363-9456451 Glycine max
Glyma.06G116200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9451363-9453362 Glycine max
Glyma.06G116200 5.0kb upstream 5.0kb upstream 8089 true Chr06: 9453363-9461451 Glycine max
Glyma.06G116200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9456452-9461451 Glycine max
Glyma.06G116200 5.0kb downstream 5.0kb downstream 8089 true Chr06: 9448363-9456451 Glycine max
Glyma.06G116200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9448363-9453362 Glycine max
Glyma.06G116200 10.0kb upstream 10.0kb upstream 13089 true Chr06: 9453363-9466451 Glycine max
Glyma.06G116200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9456452-9466451 Glycine max
Glyma.06G116200 10.0kb downstream 10.0kb downstream 13089 true Chr06: 9443363-9456451 Glycine max
Glyma.06G116200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9443363-9453362 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302191 5265 Fabidae View MSA
124060689 5270 Rosid View MSA
123739099 5271 Pentapetalae View MSA
122785681 5272 Eudicot View MSA
122050472 5273 Angiosperm View MSA
121347738 5274 Embryophyte View MSA
123424154 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.187 0.0 63.9573 High  
cufflinks 10.1186 0.0 27.0022   Low
cufflinks 10.9886 0.0 29.3161   Low
cufflinks 77.6862 0.0 255.915 High High
cufflinks 22.7044 0.0 62.6944 High  
cufflinks 19.405 0.0 52.8304    
cufflinks 64.2854 0.0 204.866 High High
cufflinks 25.0507 0.0 69.5162 High  
cufflinks 14.8216 0.0 39.7909    
cufflinks 8.508     High  
cufflinks 3.044        
cufflinks 11.929     High High
cufflinks 10.69     High  
cufflinks 3.218        
cufflinks 1.532       Low
cufflinks 5.033        
cufflinks 23.444     High High
cufflinks 7.094        
cufflinks 13.973     High High
cufflinks 4.434        
cufflinks 2.328       Low
cufflinks 5.53        
cufflinks 9.764     High  
cufflinks 2.561       Low
cufflinks 4.818        
cufflinks 4.893        

0 Strain