Gene : Glyma.06G120200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12802:SF2 - SWI/SNF COMPLEX SUBUNIT SWI3A Genomic Order:  1202
Name:  ? Glyma.06G120200 Secondary Identifier:  ? PAC:30550617
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G120200 0.5kb upstream 0.5kb upstream 4220 true Chr06: 9774043-9778262 Glycine max
Glyma.06G120200 0.5kb upstream 0.5kb upstream 500 false Chr06: 9777763-9778262 Glycine max
Glyma.06G120200 0.5kb downstream 0.5kb downstream 4220 true Chr06: 9773543-9777762 Glycine max
Glyma.06G120200 0.5kb downstream 0.5kb downstream 500 false Chr06: 9773543-9774042 Glycine max
Glyma.06G120200 1.0kb upstream 1.0kb upstream 4720 true Chr06: 9774043-9778762 Glycine max
Glyma.06G120200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9777763-9778762 Glycine max
Glyma.06G120200 1.0kb downstream 1.0kb downstream 4720 true Chr06: 9773043-9777762 Glycine max
Glyma.06G120200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9773043-9774042 Glycine max
Glyma.06G120200 2.0kb upstream 2.0kb upstream 5720 true Chr06: 9774043-9779762 Glycine max
Glyma.06G120200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9777763-9779762 Glycine max
Glyma.06G120200 2.0kb downstream 2.0kb downstream 5720 true Chr06: 9772043-9777762 Glycine max
Glyma.06G120200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9772043-9774042 Glycine max
Glyma.06G120200 5.0kb upstream 5.0kb upstream 8720 true Chr06: 9774043-9782762 Glycine max
Glyma.06G120200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9777763-9782762 Glycine max
Glyma.06G120200 5.0kb downstream 5.0kb downstream 8720 true Chr06: 9769043-9777762 Glycine max
Glyma.06G120200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9769043-9774042 Glycine max
Glyma.06G120200 10.0kb upstream 10.0kb upstream 13720 true Chr06: 9774043-9787762 Glycine max
Glyma.06G120200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9777763-9787762 Glycine max
Glyma.06G120200 10.0kb downstream 10.0kb downstream 13720 true Chr06: 9764043-9777762 Glycine max
Glyma.06G120200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9764043-9774042 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300791 5265 Fabidae View MSA
124065857 5270 Rosid View MSA
123740148 5271 Pentapetalae View MSA
122792229 5272 Eudicot View MSA
122044148 5273 Angiosperm View MSA
121349753 5274 Embryophyte View MSA
123381428 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.86542 0.0 10.2836    
cufflinks 2.38821 0.0 12.2145    
cufflinks 2.85841 0.0 13.7154   High
cufflinks 1.44637 0.0 8.6639   Low
cufflinks 2.26926 0.0 11.7236    
cufflinks 2.50061 0.0 12.5813    
cufflinks 1.80625 0.0 8.61316    
cufflinks 1.92181 0.0 10.5714    
cufflinks 1.70958 0.0 9.924    
cufflinks 0.265       Low
cufflinks 0.378        
cufflinks 0.493        
cufflinks 0.631        
cufflinks 0.638        
cufflinks 0.344       Low
cufflinks 0.637        
cufflinks 0.353        
cufflinks 0.358        
cufflinks 0.793       High
cufflinks 0.525        
cufflinks 0.339       Low
cufflinks 0.607        
cufflinks 0.76       High
cufflinks 0.455        
cufflinks 0.635        
cufflinks 0.405        

0 Strain