Gene : Glyma.06G120700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23023:SF121 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA11-RELATED Genomic Order:  1207
Name:  ? Glyma.06G120700 Secondary Identifier:  ? PAC:30553262
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWYDQC-4 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G120700 0.5kb upstream 0.5kb upstream 3049 true Chr06: 9833098-9836146 Glycine max
Glyma.06G120700 0.5kb upstream 0.5kb upstream 500 false Chr06: 9833098-9833597 Glycine max
Glyma.06G120700 0.5kb downstream 0.5kb downstream 3049 true Chr06: 9833598-9836646 Glycine max
Glyma.06G120700 0.5kb downstream 0.5kb downstream 500 false Chr06: 9836147-9836646 Glycine max
Glyma.06G120700 1.0kb upstream 1.0kb upstream 3549 true Chr06: 9832598-9836146 Glycine max
Glyma.06G120700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9832598-9833597 Glycine max
Glyma.06G120700 1.0kb downstream 1.0kb downstream 3549 true Chr06: 9833598-9837146 Glycine max
Glyma.06G120700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9836147-9837146 Glycine max
Glyma.06G120700 2.0kb upstream 2.0kb upstream 4549 true Chr06: 9831598-9836146 Glycine max
Glyma.06G120700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9831598-9833597 Glycine max
Glyma.06G120700 2.0kb downstream 2.0kb downstream 4549 true Chr06: 9833598-9838146 Glycine max
Glyma.06G120700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9836147-9838146 Glycine max
Glyma.06G120700 5.0kb upstream 5.0kb upstream 7549 true Chr06: 9828598-9836146 Glycine max
Glyma.06G120700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9828598-9833597 Glycine max
Glyma.06G120700 5.0kb downstream 5.0kb downstream 7549 true Chr06: 9833598-9841146 Glycine max
Glyma.06G120700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9836147-9841146 Glycine max
Glyma.06G120700 10.0kb upstream 10.0kb upstream 12549 true Chr06: 9823598-9836146 Glycine max
Glyma.06G120700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9823598-9833597 Glycine max
Glyma.06G120700 10.0kb downstream 10.0kb downstream 12549 true Chr06: 9833598-9846146 Glycine max
Glyma.06G120700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9836147-9846146 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301765 5265 Fabidae View MSA
124069751 5270 Rosid View MSA
123749752 5271 Pentapetalae View MSA
122794899 5272 Eudicot View MSA
122047342 5273 Angiosperm View MSA
121310731 5274 Embryophyte View MSA
123348144 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.90244 0.0 6.36754   High
cufflinks 0.0667401 0.0 0.269379 Low  
cufflinks 0.0117775 0.0 0.0541078 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.240126 0.0 0.922379    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0275849 0.0 0.117563 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.45        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain