Gene : Glyma.06G121000 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR33133:SF5 - EXPRESSED PROTEIN Genomic Order:  1210
Name:  ? Glyma.06G121000 Secondary Identifier:  ? PAC:30554128
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G121000 0.5kb upstream 0.5kb upstream 2228 true Chr06: 9848464-9850691 Glycine max
Glyma.06G121000 0.5kb upstream 0.5kb upstream 500 false Chr06: 9850192-9850691 Glycine max
Glyma.06G121000 0.5kb downstream 0.5kb downstream 2228 true Chr06: 9847964-9850191 Glycine max
Glyma.06G121000 0.5kb downstream 0.5kb downstream 500 false Chr06: 9847964-9848463 Glycine max
Glyma.06G121000 1.0kb upstream 1.0kb upstream 2728 true Chr06: 9848464-9851191 Glycine max
Glyma.06G121000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 9850192-9851191 Glycine max
Glyma.06G121000 1.0kb downstream 1.0kb downstream 2728 true Chr06: 9847464-9850191 Glycine max
Glyma.06G121000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 9847464-9848463 Glycine max
Glyma.06G121000 2.0kb upstream 2.0kb upstream 3728 true Chr06: 9848464-9852191 Glycine max
Glyma.06G121000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 9850192-9852191 Glycine max
Glyma.06G121000 2.0kb downstream 2.0kb downstream 3728 true Chr06: 9846464-9850191 Glycine max
Glyma.06G121000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 9846464-9848463 Glycine max
Glyma.06G121000 5.0kb upstream 5.0kb upstream 6728 true Chr06: 9848464-9855191 Glycine max
Glyma.06G121000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 9850192-9855191 Glycine max
Glyma.06G121000 5.0kb downstream 5.0kb downstream 6728 true Chr06: 9843464-9850191 Glycine max
Glyma.06G121000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 9843464-9848463 Glycine max
Glyma.06G121000 10.0kb upstream 10.0kb upstream 11728 true Chr06: 9848464-9860191 Glycine max
Glyma.06G121000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 9850192-9860191 Glycine max
Glyma.06G121000 10.0kb downstream 10.0kb downstream 11728 true Chr06: 9838464-9850191 Glycine max
Glyma.06G121000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 9838464-9848463 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312015 5265 Fabidae View MSA
124072395 5270 Rosid View MSA
123752432 5271 Pentapetalae View MSA
122795545 5272 Eudicot View MSA
122047131 5273 Angiosperm View MSA
121347581 5274 Embryophyte View MSA
123380576 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.09094 0.0 7.06011    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0194947 0.0 0.0862898 Low Low
cufflinks 0.00849996 0.0 0.0408681 Low Low
cufflinks 39.2117 0.0 106.122 High  
cufflinks 189.991 0.0 644.53 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.75602 0.0 6.03774    
cufflinks 56.2351 0.0 156.748 High  
cufflinks 0.008     Low Low
cufflinks 29.581     High  
cufflinks 0.102     Low  
cufflinks 25.562     High  
cufflinks 8.844     High  
cufflinks 32.273     High  
cufflinks 0.031     Low Low
cufflinks 31.017     High  
cufflinks 0.042     Low Low
cufflinks 0.015     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 28.191     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 40.291     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 36.23     High  

0 Strain