Gene : Glyma.06G162300 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11972:SF64 - RESPIRATORY BURST OXIDASE HOMOLOG PROTEIN A-RELATED Genomic Order:  1623
Name:  ? Glyma.06G162300 Secondary Identifier:  ? PAC:30550457
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G162300 0.5kb upstream 0.5kb upstream 7802 true Chr06: 13406293-13414094 Glycine max
Glyma.06G162300 0.5kb upstream 0.5kb upstream 500 false Chr06: 13406293-13406792 Glycine max
Glyma.06G162300 0.5kb downstream 0.5kb downstream 7802 true Chr06: 13406793-13414594 Glycine max
Glyma.06G162300 0.5kb downstream 0.5kb downstream 500 false Chr06: 13414095-13414594 Glycine max
Glyma.06G162300 1.0kb upstream 1.0kb upstream 8302 true Chr06: 13405793-13414094 Glycine max
Glyma.06G162300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13405793-13406792 Glycine max
Glyma.06G162300 1.0kb downstream 1.0kb downstream 8302 true Chr06: 13406793-13415094 Glycine max
Glyma.06G162300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13414095-13415094 Glycine max
Glyma.06G162300 2.0kb upstream 2.0kb upstream 9302 true Chr06: 13404793-13414094 Glycine max
Glyma.06G162300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13404793-13406792 Glycine max
Glyma.06G162300 2.0kb downstream 2.0kb downstream 9302 true Chr06: 13406793-13416094 Glycine max
Glyma.06G162300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13414095-13416094 Glycine max
Glyma.06G162300 5.0kb upstream 5.0kb upstream 12302 true Chr06: 13401793-13414094 Glycine max
Glyma.06G162300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13401793-13406792 Glycine max
Glyma.06G162300 5.0kb downstream 5.0kb downstream 12302 true Chr06: 13406793-13419094 Glycine max
Glyma.06G162300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13414095-13419094 Glycine max
Glyma.06G162300 10.0kb upstream 10.0kb upstream 17302 true Chr06: 13396793-13414094 Glycine max
Glyma.06G162300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13396793-13406792 Glycine max
Glyma.06G162300 10.0kb downstream 10.0kb downstream 17302 true Chr06: 13406793-13424094 Glycine max
Glyma.06G162300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13414095-13424094 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314275 5265 Fabidae View MSA
124063866 5270 Rosid View MSA
123751204 5271 Pentapetalae View MSA
122794480 5272 Eudicot View MSA
122044435 5273 Angiosperm View MSA
121350202 5274 Embryophyte View MSA
123427915 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.7737 0.0 45.5416    
cufflinks 15.5642 0.0 56.3959    
cufflinks 30.5081 0.0 114.117 High High
cufflinks 20.7029 0.0 81.3965 High  
cufflinks 7.71628 0.0 27.5367    
cufflinks 2.76235 0.0 10.3621   Low
cufflinks 10.4946 0.0 37.656    
cufflinks 13.674 0.0 50.2685    
cufflinks 9.46938 0.0 33.8283    
cufflinks 5.583        
cufflinks 2.336        
cufflinks 7.229     High  
cufflinks 1.18       Low
cufflinks 0.809       Low
cufflinks 6.175     High  
cufflinks 5.074        
cufflinks 9.56     High High
cufflinks 8.092     High  
cufflinks 3.18        
cufflinks 6.953     High  
cufflinks 3.6        
cufflinks 6.602        
cufflinks 6.323        
cufflinks 3.56        
cufflinks 5.559        
cufflinks 11.157     High High

0 Strain