Gene : Glyma.06G163300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11062:SF81 - BETA-1,4-XYLOSYLTRANSFERASE IRX10L-RELATED Genomic Order:  1633
Name:  ? Glyma.06G163300 Secondary Identifier:  ? PAC:30553422
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5980 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G163300 0.5kb upstream 0.5kb upstream 5330 true Chr06: 13485736-13491065 Glycine max
Glyma.06G163300 0.5kb upstream 0.5kb upstream 500 false Chr06: 13490566-13491065 Glycine max
Glyma.06G163300 0.5kb downstream 0.5kb downstream 5330 true Chr06: 13485236-13490565 Glycine max
Glyma.06G163300 0.5kb downstream 0.5kb downstream 500 false Chr06: 13485236-13485735 Glycine max
Glyma.06G163300 1.0kb upstream 1.0kb upstream 5830 true Chr06: 13485736-13491565 Glycine max
Glyma.06G163300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13490566-13491565 Glycine max
Glyma.06G163300 1.0kb downstream 1.0kb downstream 5830 true Chr06: 13484736-13490565 Glycine max
Glyma.06G163300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13484736-13485735 Glycine max
Glyma.06G163300 2.0kb upstream 2.0kb upstream 6830 true Chr06: 13485736-13492565 Glycine max
Glyma.06G163300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13490566-13492565 Glycine max
Glyma.06G163300 2.0kb downstream 2.0kb downstream 6830 true Chr06: 13483736-13490565 Glycine max
Glyma.06G163300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13483736-13485735 Glycine max
Glyma.06G163300 5.0kb upstream 5.0kb upstream 9830 true Chr06: 13485736-13495565 Glycine max
Glyma.06G163300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13490566-13495565 Glycine max
Glyma.06G163300 5.0kb downstream 5.0kb downstream 9830 true Chr06: 13480736-13490565 Glycine max
Glyma.06G163300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13480736-13485735 Glycine max
Glyma.06G163300 10.0kb upstream 10.0kb upstream 14830 true Chr06: 13485736-13500565 Glycine max
Glyma.06G163300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13490566-13500565 Glycine max
Glyma.06G163300 10.0kb downstream 10.0kb downstream 14830 true Chr06: 13475736-13490565 Glycine max
Glyma.06G163300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13475736-13485735 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301284 5265 Fabidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.10777 0.0 17.1009   Low
cufflinks 6.43203 0.0 17.9136   Low
cufflinks 14.4854 0.0 38.6612    
cufflinks 27.2445 0.0 73.7737 High High
cufflinks 10.0312 0.0 27.0819    
cufflinks 17.9543 0.0 47.932    
cufflinks 8.87451 0.0 24.1071    
cufflinks 24.2979 0.0 65.4477 High High
cufflinks 10.0247 0.0 27.0388    
cufflinks 6.825       High
cufflinks 1.958       Low
cufflinks 5.324        
cufflinks 6.613       High
cufflinks 4.484        
cufflinks 1.322       Low
cufflinks 2.385        
cufflinks 6.905     High High
cufflinks 4.224        
cufflinks 4.455        
cufflinks 2.337        
cufflinks 3.568        
cufflinks 2.392        
cufflinks 2.331        
cufflinks 3.145        
cufflinks 2.004       Low
cufflinks 3.849        

0 Strain