Gene : Glyma.06G163800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR10857:SF26 - PROTEIN BONZAI 3 Genomic Order:  1638
Name:  ? Glyma.06G163800 Secondary Identifier:  ? PAC:30553819
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G163800 0.5kb upstream 0.5kb upstream 8588 true Chr06: 13534650-13543237 Glycine max
Glyma.06G163800 0.5kb upstream 0.5kb upstream 500 false Chr06: 13542738-13543237 Glycine max
Glyma.06G163800 0.5kb downstream 0.5kb downstream 8588 true Chr06: 13534150-13542737 Glycine max
Glyma.06G163800 0.5kb downstream 0.5kb downstream 500 false Chr06: 13534150-13534649 Glycine max
Glyma.06G163800 1.0kb upstream 1.0kb upstream 9088 true Chr06: 13534650-13543737 Glycine max
Glyma.06G163800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13542738-13543737 Glycine max
Glyma.06G163800 1.0kb downstream 1.0kb downstream 9088 true Chr06: 13533650-13542737 Glycine max
Glyma.06G163800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13533650-13534649 Glycine max
Glyma.06G163800 2.0kb upstream 2.0kb upstream 10088 true Chr06: 13534650-13544737 Glycine max
Glyma.06G163800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13542738-13544737 Glycine max
Glyma.06G163800 2.0kb downstream 2.0kb downstream 10088 true Chr06: 13532650-13542737 Glycine max
Glyma.06G163800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13532650-13534649 Glycine max
Glyma.06G163800 5.0kb upstream 5.0kb upstream 13088 true Chr06: 13534650-13547737 Glycine max
Glyma.06G163800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13542738-13547737 Glycine max
Glyma.06G163800 5.0kb downstream 5.0kb downstream 13088 true Chr06: 13529650-13542737 Glycine max
Glyma.06G163800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13529650-13534649 Glycine max
Glyma.06G163800 10.0kb upstream 10.0kb upstream 18088 true Chr06: 13534650-13552737 Glycine max
Glyma.06G163800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13542738-13552737 Glycine max
Glyma.06G163800 10.0kb downstream 10.0kb downstream 18088 true Chr06: 13524650-13542737 Glycine max
Glyma.06G163800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13524650-13534649 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255094 5265 Fabidae View MSA
124064124 5270 Rosid View MSA
123745064 5271 Pentapetalae View MSA
122788484 5272 Eudicot View MSA
122043843 5273 Angiosperm View MSA
121351001 5274 Embryophyte View MSA
123424570 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.71307 0.0 33.4388    
cufflinks 2.92379 0.0 11.1427   Low
cufflinks 5.04255 0.0 19.1346    
cufflinks 7.30209 0.0 26.0235    
cufflinks 5.80488 0.0 21.5378    
cufflinks 14.3704 0.0 48.6732   High
cufflinks 2.26712 0.0 9.44264   Low
cufflinks 18.5455 0.0 63.724   High
cufflinks 4.51039 0.0 15.1718    
cufflinks 2.971       High
cufflinks 1.4        
cufflinks 0.648       Low
cufflinks 1.146        
cufflinks 1.174        
cufflinks 0.958        
cufflinks 1.036        
cufflinks 3.093       High
cufflinks 0.663        
cufflinks 0.627       Low
cufflinks 0.588       Low
cufflinks 1.691        
cufflinks 0.845        
cufflinks 0.766        
cufflinks 1.402        
cufflinks 0.72        
cufflinks 2.144       High

0 Strain