Gene : Glyma.06G158300 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG3487 - TRAPP 20 K subunit Genomic Order:  1583
Name:  ? Glyma.06G158300 Secondary Identifier:  ? PAC:30550051
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G158300 0.5kb upstream 0.5kb upstream 3360 true Chr06: 13001094-13004453 Glycine max
Glyma.06G158300 0.5kb upstream 0.5kb upstream 500 false Chr06: 13003954-13004453 Glycine max
Glyma.06G158300 0.5kb downstream 0.5kb downstream 3360 true Chr06: 13000594-13003953 Glycine max
Glyma.06G158300 0.5kb downstream 0.5kb downstream 500 false Chr06: 13000594-13001093 Glycine max
Glyma.06G158300 1.0kb upstream 1.0kb upstream 3860 true Chr06: 13001094-13004953 Glycine max
Glyma.06G158300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13003954-13004953 Glycine max
Glyma.06G158300 1.0kb downstream 1.0kb downstream 3860 true Chr06: 13000094-13003953 Glycine max
Glyma.06G158300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13000094-13001093 Glycine max
Glyma.06G158300 2.0kb upstream 2.0kb upstream 4860 true Chr06: 13001094-13005953 Glycine max
Glyma.06G158300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13003954-13005953 Glycine max
Glyma.06G158300 2.0kb downstream 2.0kb downstream 4860 true Chr06: 12999094-13003953 Glycine max
Glyma.06G158300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12999094-13001093 Glycine max
Glyma.06G158300 5.0kb upstream 5.0kb upstream 7860 true Chr06: 13001094-13008953 Glycine max
Glyma.06G158300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13003954-13008953 Glycine max
Glyma.06G158300 5.0kb downstream 5.0kb downstream 7860 true Chr06: 12996094-13003953 Glycine max
Glyma.06G158300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12996094-13001093 Glycine max
Glyma.06G158300 10.0kb upstream 10.0kb upstream 12860 true Chr06: 13001094-13013953 Glycine max
Glyma.06G158300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13003954-13013953 Glycine max
Glyma.06G158300 10.0kb downstream 10.0kb downstream 12860 true Chr06: 12991094-13003953 Glycine max
Glyma.06G158300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12991094-13001093 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313980 5265 Fabidae View MSA
124060844 5270 Rosid View MSA
123746210 5271 Pentapetalae View MSA
122790146 5272 Eudicot View MSA
122049402 5273 Angiosperm View MSA
123429051 5275 Viridiplantae View MSA
121344946 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.7119 0.0 34.2895   Low
cufflinks 17.1352 0.0 47.8601    
cufflinks 10.9164 0.0 32.0786   Low
cufflinks 14.0369 0.0 40.0686    
cufflinks 19.229 0.0 53.2422    
cufflinks 21.7132 0.0 59.5025   High
cufflinks 15.4483 0.0 43.7743    
cufflinks 18.7121 0.0 51.8513    
cufflinks 13.7134 0.0 39.2225    
cufflinks 4.847        
cufflinks 1.427       Low
cufflinks 3.005        
cufflinks 5.861       High
cufflinks 7.889     High High
cufflinks 1.549       Low
cufflinks 3.446        
cufflinks 2.372        
cufflinks 4.578        
cufflinks 5.043        
cufflinks 2.807        
cufflinks 2.211        
cufflinks 3.659        
cufflinks 3.594        
cufflinks 2.348        
cufflinks 2.74        
cufflinks 2.9        

0 Strain