Gene : Glyma.06G159700 G. max Wm82.a2.v1
Defline:  (1 of 3) PF02791//PF10537//PF15613//PF15614 - DDT domain (DDT) // ATP-utilising chromatin assembly and remodelling N-terminal (WAC_Acf1_DNA_bd) // WSTF, HB1, Itc1p, MBD9 motif 2 (WHIM2) // WSTF, HB1, Itc1p, MBD9 motif 3 (WHIM3) Genomic Order:  1597
Name:  ? Glyma.06G159700 Secondary Identifier:  ? PAC:30550812
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G159700 0.5kb upstream 0.5kb upstream 6323 true Chr06: 13172344-13178666 Glycine max
Glyma.06G159700 0.5kb upstream 0.5kb upstream 500 false Chr06: 13172344-13172843 Glycine max
Glyma.06G159700 0.5kb downstream 0.5kb downstream 6323 true Chr06: 13172844-13179166 Glycine max
Glyma.06G159700 0.5kb downstream 0.5kb downstream 500 false Chr06: 13178667-13179166 Glycine max
Glyma.06G159700 1.0kb upstream 1.0kb upstream 6823 true Chr06: 13171844-13178666 Glycine max
Glyma.06G159700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13171844-13172843 Glycine max
Glyma.06G159700 1.0kb downstream 1.0kb downstream 6823 true Chr06: 13172844-13179666 Glycine max
Glyma.06G159700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13178667-13179666 Glycine max
Glyma.06G159700 2.0kb upstream 2.0kb upstream 7823 true Chr06: 13170844-13178666 Glycine max
Glyma.06G159700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13170844-13172843 Glycine max
Glyma.06G159700 2.0kb downstream 2.0kb downstream 7823 true Chr06: 13172844-13180666 Glycine max
Glyma.06G159700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13178667-13180666 Glycine max
Glyma.06G159700 5.0kb upstream 5.0kb upstream 10823 true Chr06: 13167844-13178666 Glycine max
Glyma.06G159700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13167844-13172843 Glycine max
Glyma.06G159700 5.0kb downstream 5.0kb downstream 10823 true Chr06: 13172844-13183666 Glycine max
Glyma.06G159700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13178667-13183666 Glycine max
Glyma.06G159700 10.0kb upstream 10.0kb upstream 15823 true Chr06: 13162844-13178666 Glycine max
Glyma.06G159700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13162844-13172843 Glycine max
Glyma.06G159700 10.0kb downstream 10.0kb downstream 15823 true Chr06: 13172844-13188666 Glycine max
Glyma.06G159700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13178667-13188666 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254373 5265 Fabidae View MSA
123996563 5270 Rosid View MSA
123571006 5271 Pentapetalae View MSA
122605738 5272 Eudicot View MSA
122050407 5273 Angiosperm View MSA
121345343 5274 Embryophyte View MSA
123380199 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.335695 0.0 2.90178    
cufflinks 1.25144 0.0 5.92204   High
cufflinks 1.31384 0.0 7.63827   High
cufflinks 0.474987 0.0 2.75884    
cufflinks 0.496427 0.0 2.22574    
cufflinks 0.334769 0.0 2.05316    
cufflinks 0.883349 0.0 4.78534    
cufflinks 0.206016 0.0 1.01817 Low Low
cufflinks 0.46306 0.0 3.35784    
cufflinks 0.06     Low  
cufflinks 0.019     Low Low
cufflinks 0.275       High
cufflinks 0.113        
cufflinks 0.15        
cufflinks 0.006     Low Low
cufflinks 0.063     Low  
cufflinks 0.042     Low  
cufflinks 0.168        
cufflinks 0.379       High
cufflinks 0.051     Low  
cufflinks 0.018     Low Low
cufflinks 0.061     Low  
cufflinks 0.159        
cufflinks 0.03     Low  
cufflinks 0.039     Low  
cufflinks 0.027     Low  

0 Strain