Gene : Glyma.06G160500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10641:SF643 - MYB TRANSCRIPTION FACTOR-RELATED Genomic Order:  1605
Name:  ? Glyma.06G160500 Secondary Identifier:  ? PAC:30551304
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G160500 0.5kb upstream 0.5kb upstream 2159 true Chr06: 13247611-13249769 Glycine max
Glyma.06G160500 0.5kb upstream 0.5kb upstream 500 false Chr06: 13247611-13248110 Glycine max
Glyma.06G160500 0.5kb downstream 0.5kb downstream 2159 true Chr06: 13248111-13250269 Glycine max
Glyma.06G160500 0.5kb downstream 0.5kb downstream 500 false Chr06: 13249770-13250269 Glycine max
Glyma.06G160500 1.0kb upstream 1.0kb upstream 2659 true Chr06: 13247111-13249769 Glycine max
Glyma.06G160500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13247111-13248110 Glycine max
Glyma.06G160500 1.0kb downstream 1.0kb downstream 2659 true Chr06: 13248111-13250769 Glycine max
Glyma.06G160500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13249770-13250769 Glycine max
Glyma.06G160500 2.0kb upstream 2.0kb upstream 3659 true Chr06: 13246111-13249769 Glycine max
Glyma.06G160500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13246111-13248110 Glycine max
Glyma.06G160500 2.0kb downstream 2.0kb downstream 3659 true Chr06: 13248111-13251769 Glycine max
Glyma.06G160500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13249770-13251769 Glycine max
Glyma.06G160500 5.0kb upstream 5.0kb upstream 6659 true Chr06: 13243111-13249769 Glycine max
Glyma.06G160500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13243111-13248110 Glycine max
Glyma.06G160500 5.0kb downstream 5.0kb downstream 6659 true Chr06: 13248111-13254769 Glycine max
Glyma.06G160500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13249770-13254769 Glycine max
Glyma.06G160500 10.0kb upstream 10.0kb upstream 11659 true Chr06: 13238111-13249769 Glycine max
Glyma.06G160500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13238111-13248110 Glycine max
Glyma.06G160500 10.0kb downstream 10.0kb downstream 11659 true Chr06: 13248111-13259769 Glycine max
Glyma.06G160500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13249770-13259769 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304719 5265 Fabidae View MSA
124071015 5270 Rosid View MSA
123750184 5271 Pentapetalae View MSA
122796704 5272 Eudicot View MSA
122049287 5273 Angiosperm View MSA
123429079 5275 Viridiplantae View MSA
121351179 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.37909 0.0 21.2757    
cufflinks 15.1613 0.0 41.0065    
cufflinks 14.1112 0.0 38.3636    
cufflinks 4.51232 0.0 13.8629    
cufflinks 10.7247 0.0 29.6733    
cufflinks 26.0111 0.0 69.3953 High High
cufflinks 1.87351 0.0 6.46991   Low
cufflinks 8.82829 0.0 24.7976    
cufflinks 11.4217 0.0 31.4396    
cufflinks 2.7       Low
cufflinks 6.692     High  
cufflinks 17.855     High High
cufflinks 9.578     High  
cufflinks 3.304       Low
cufflinks 4.316        
cufflinks 3.872        
cufflinks 5.727        
cufflinks 18.952     High High
cufflinks 10.147     High  
cufflinks 4.159        
cufflinks 9.084     High  
cufflinks 4.863        
cufflinks 9.216     High  
cufflinks 8.714     High  
cufflinks 4.224        
cufflinks 16.457     High High

0 Strain