Gene : Glyma.06G161200 G. max Wm82.a2.v1
Defline:  (1 of 10) PTHR24349:SF166 - CALCIUM-DEPENDENT PROTEIN KINASE 11-RELATED Genomic Order:  1612
Name:  ? Glyma.06G161200 Secondary Identifier:  ? PAC:30551124
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G161200 0.5kb upstream 0.5kb upstream 5251 true Chr06: 13326451-13331701 Glycine max
Glyma.06G161200 0.5kb upstream 0.5kb upstream 500 false Chr06: 13326451-13326950 Glycine max
Glyma.06G161200 0.5kb downstream 0.5kb downstream 5251 true Chr06: 13326951-13332201 Glycine max
Glyma.06G161200 0.5kb downstream 0.5kb downstream 500 false Chr06: 13331702-13332201 Glycine max
Glyma.06G161200 1.0kb upstream 1.0kb upstream 5751 true Chr06: 13325951-13331701 Glycine max
Glyma.06G161200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 13325951-13326950 Glycine max
Glyma.06G161200 1.0kb downstream 1.0kb downstream 5751 true Chr06: 13326951-13332701 Glycine max
Glyma.06G161200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 13331702-13332701 Glycine max
Glyma.06G161200 2.0kb upstream 2.0kb upstream 6751 true Chr06: 13324951-13331701 Glycine max
Glyma.06G161200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 13324951-13326950 Glycine max
Glyma.06G161200 2.0kb downstream 2.0kb downstream 6751 true Chr06: 13326951-13333701 Glycine max
Glyma.06G161200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 13331702-13333701 Glycine max
Glyma.06G161200 5.0kb upstream 5.0kb upstream 9751 true Chr06: 13321951-13331701 Glycine max
Glyma.06G161200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 13321951-13326950 Glycine max
Glyma.06G161200 5.0kb downstream 5.0kb downstream 9751 true Chr06: 13326951-13336701 Glycine max
Glyma.06G161200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 13331702-13336701 Glycine max
Glyma.06G161200 10.0kb upstream 10.0kb upstream 14751 true Chr06: 13316951-13331701 Glycine max
Glyma.06G161200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 13316951-13326950 Glycine max
Glyma.06G161200 10.0kb downstream 10.0kb downstream 14751 true Chr06: 13326951-13341701 Glycine max
Glyma.06G161200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 13331702-13341701 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311045 5265 Fabidae View MSA
124069708 5270 Rosid View MSA
123741053 5271 Pentapetalae View MSA
122787584 5272 Eudicot View MSA
122047311 5273 Angiosperm View MSA
121310726 5274 Embryophyte View MSA
123427978 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.4874 0.0 25.577    
cufflinks 8.35177 0.0 22.6934    
cufflinks 5.12227 0.0 14.4945   Low
cufflinks 22.1106 0.0 59.4507 High High
cufflinks 17.693 0.0 47.2818   High
cufflinks 8.08787 0.0 21.9856    
cufflinks 15.3849 0.0 41.046    
cufflinks 10.5713 0.0 28.3851    
cufflinks 9.6309 0.0 25.9504    
cufflinks 5.23        
cufflinks 1.392       Low
cufflinks 4.405        
cufflinks 9.725     High High
cufflinks 16.157     High High
cufflinks 1.27       Low
cufflinks 7.692     High  
cufflinks 2.686        
cufflinks 8.554     High  
cufflinks 4.931        
cufflinks 4.926        
cufflinks 2.477        
cufflinks 5.684        
cufflinks 7.263        
cufflinks 1.562       Low
cufflinks 4.908        
cufflinks 5.109        

0 Strain