Gene : Glyma.06G152500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23076:SF49 - AAA-TYPE ATPASE FAMILY PROTEIN Genomic Order:  1525
Name:  ? Glyma.06G152500 Secondary Identifier:  ? PAC:30553583
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G152500 0.5kb upstream 0.5kb upstream 9132 true Chr06: 12424219-12433350 Glycine max
Glyma.06G152500 0.5kb upstream 0.5kb upstream 500 false Chr06: 12432851-12433350 Glycine max
Glyma.06G152500 0.5kb downstream 0.5kb downstream 9132 true Chr06: 12423719-12432850 Glycine max
Glyma.06G152500 0.5kb downstream 0.5kb downstream 500 false Chr06: 12423719-12424218 Glycine max
Glyma.06G152500 1.0kb upstream 1.0kb upstream 9632 true Chr06: 12424219-12433850 Glycine max
Glyma.06G152500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12432851-12433850 Glycine max
Glyma.06G152500 1.0kb downstream 1.0kb downstream 9632 true Chr06: 12423219-12432850 Glycine max
Glyma.06G152500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12423219-12424218 Glycine max
Glyma.06G152500 2.0kb upstream 2.0kb upstream 10632 true Chr06: 12424219-12434850 Glycine max
Glyma.06G152500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12432851-12434850 Glycine max
Glyma.06G152500 2.0kb downstream 2.0kb downstream 10632 true Chr06: 12422219-12432850 Glycine max
Glyma.06G152500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12422219-12424218 Glycine max
Glyma.06G152500 5.0kb upstream 5.0kb upstream 13632 true Chr06: 12424219-12437850 Glycine max
Glyma.06G152500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12432851-12437850 Glycine max
Glyma.06G152500 5.0kb downstream 5.0kb downstream 13632 true Chr06: 12419219-12432850 Glycine max
Glyma.06G152500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12419219-12424218 Glycine max
Glyma.06G152500 10.0kb upstream 10.0kb upstream 18632 true Chr06: 12424219-12442850 Glycine max
Glyma.06G152500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12432851-12442850 Glycine max
Glyma.06G152500 10.0kb downstream 10.0kb downstream 18632 true Chr06: 12414219-12432850 Glycine max
Glyma.06G152500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12414219-12424218 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302710 5265 Fabidae View MSA
124066007 5270 Rosid View MSA
123738416 5271 Pentapetalae View MSA
122790727 5272 Eudicot View MSA
122043853 5273 Angiosperm View MSA
121345104 5274 Embryophyte View MSA
123380156 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5891 0.0 36.0484   High
cufflinks 7.06135 0.0 24.112    
cufflinks 4.10304 0.0 14.8078   Low
cufflinks 7.16291 0.0 24.3771    
cufflinks 6.52857 0.0 22.3952    
cufflinks 2.76013 0.0 10.9129   Low
cufflinks 8.05446 0.0 27.3667    
cufflinks 6.20449 0.0 21.3096    
cufflinks 5.71043 0.0 17.1781    
cufflinks 1.169        
cufflinks 0.167       Low
cufflinks 1.643        
cufflinks 1.375        
cufflinks 1.501        
cufflinks 0.523        
cufflinks 2.295        
cufflinks 0.759        
cufflinks 2.059        
cufflinks 2.15        
cufflinks 1.922        
cufflinks 0.285       Low
cufflinks 2.0        
cufflinks 2.574       High
cufflinks 0.231       Low
cufflinks 2.125        
cufflinks 0.643        

0 Strain