Gene : Glyma.06G155600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR11390:SF21 - DNA TOPOISOMERASE 3-ALPHA Genomic Order:  1556
Name:  ? Glyma.06G155600 Secondary Identifier:  ? PAC:30552159
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G155600 0.5kb upstream 0.5kb upstream 51308 true Chr06: 12716022-12767329 Glycine max
Glyma.06G155600 0.5kb upstream 0.5kb upstream 500 false Chr06: 12766830-12767329 Glycine max
Glyma.06G155600 0.5kb downstream 0.5kb downstream 51308 true Chr06: 12715522-12766829 Glycine max
Glyma.06G155600 0.5kb downstream 0.5kb downstream 500 false Chr06: 12715522-12716021 Glycine max
Glyma.06G155600 1.0kb upstream 1.0kb upstream 51808 true Chr06: 12716022-12767829 Glycine max
Glyma.06G155600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12766830-12767829 Glycine max
Glyma.06G155600 1.0kb downstream 1.0kb downstream 51808 true Chr06: 12715022-12766829 Glycine max
Glyma.06G155600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12715022-12716021 Glycine max
Glyma.06G155600 2.0kb upstream 2.0kb upstream 52808 true Chr06: 12716022-12768829 Glycine max
Glyma.06G155600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12766830-12768829 Glycine max
Glyma.06G155600 2.0kb downstream 2.0kb downstream 52808 true Chr06: 12714022-12766829 Glycine max
Glyma.06G155600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12714022-12716021 Glycine max
Glyma.06G155600 5.0kb upstream 5.0kb upstream 55808 true Chr06: 12716022-12771829 Glycine max
Glyma.06G155600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12766830-12771829 Glycine max
Glyma.06G155600 5.0kb downstream 5.0kb downstream 55808 true Chr06: 12711022-12766829 Glycine max
Glyma.06G155600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12711022-12716021 Glycine max
Glyma.06G155600 10.0kb upstream 10.0kb upstream 60808 true Chr06: 12716022-12776829 Glycine max
Glyma.06G155600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12766830-12776829 Glycine max
Glyma.06G155600 10.0kb downstream 10.0kb downstream 60808 true Chr06: 12706022-12766829 Glycine max
Glyma.06G155600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12706022-12716021 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041072 5273 Angiosperm View MSA
122308584 5265 Fabidae View MSA
124073148 5270 Rosid View MSA
123740785 5271 Pentapetalae View MSA
122785761 5272 Eudicot View MSA
121346575 5274 Embryophyte View MSA
123425013 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.415782 0.0 2.39807   Low
cufflinks 1.51237 0.0 8.29419   High
cufflinks 1.02816 0.0 4.71708    
cufflinks 1.08418 0.0 8.4853    
cufflinks 1.23372 0.0 6.38418    
cufflinks 0.79299 0.0 5.31841    
cufflinks 0.893894 0.0 5.26935    
cufflinks 0.745502 0.0 5.29988    
cufflinks 1.40285 0.0 6.92037    
cufflinks 0.007     Low  
cufflinks 0.03     Low High
cufflinks 0.013     Low  
cufflinks 0.008     Low  
cufflinks 0.01     Low  
cufflinks 0.03     Low High
cufflinks 0.011     Low  
cufflinks 0.011     Low  
cufflinks 0.008     Low  
cufflinks 0.019     Low  
cufflinks 0.005     Low Low
cufflinks 0.035     Low High
cufflinks 0.008     Low  
cufflinks 0.013     Low  
cufflinks 0.038     Low High
cufflinks 0.008     Low  
cufflinks 0.011     Low  

0 Strain