Gene : Glyma.06G143800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR30540:SF6 - POTASSIUM TRANSPORTER 2 Genomic Order:  1438
Name:  ? Glyma.06G143800 Secondary Identifier:  ? PAC:30552118
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G143800 0.5kb upstream 0.5kb upstream 7002 true Chr06: 11705882-11712883 Glycine max
Glyma.06G143800 0.5kb upstream 0.5kb upstream 500 false Chr06: 11712384-11712883 Glycine max
Glyma.06G143800 0.5kb downstream 0.5kb downstream 7002 true Chr06: 11705382-11712383 Glycine max
Glyma.06G143800 0.5kb downstream 0.5kb downstream 500 false Chr06: 11705382-11705881 Glycine max
Glyma.06G143800 1.0kb upstream 1.0kb upstream 7502 true Chr06: 11705882-11713383 Glycine max
Glyma.06G143800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11712384-11713383 Glycine max
Glyma.06G143800 1.0kb downstream 1.0kb downstream 7502 true Chr06: 11704882-11712383 Glycine max
Glyma.06G143800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11704882-11705881 Glycine max
Glyma.06G143800 2.0kb upstream 2.0kb upstream 8502 true Chr06: 11705882-11714383 Glycine max
Glyma.06G143800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11712384-11714383 Glycine max
Glyma.06G143800 2.0kb downstream 2.0kb downstream 8502 true Chr06: 11703882-11712383 Glycine max
Glyma.06G143800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11703882-11705881 Glycine max
Glyma.06G143800 5.0kb upstream 5.0kb upstream 11502 true Chr06: 11705882-11717383 Glycine max
Glyma.06G143800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11712384-11717383 Glycine max
Glyma.06G143800 5.0kb downstream 5.0kb downstream 11502 true Chr06: 11700882-11712383 Glycine max
Glyma.06G143800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11700882-11705881 Glycine max
Glyma.06G143800 10.0kb upstream 10.0kb upstream 16502 true Chr06: 11705882-11722383 Glycine max
Glyma.06G143800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11712384-11722383 Glycine max
Glyma.06G143800 10.0kb downstream 10.0kb downstream 16502 true Chr06: 11695882-11712383 Glycine max
Glyma.06G143800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11695882-11705881 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300171 5265 Fabidae View MSA
124064165 5270 Rosid View MSA
123749709 5271 Pentapetalae View MSA
122787905 5272 Eudicot View MSA
122045012 5273 Angiosperm View MSA
123429147 5275 Viridiplantae View MSA
121310386 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.77419 0.0 41.0026    
cufflinks 18.4437 0.0 102.949   High
cufflinks 6.07613 0.0 31.5128    
cufflinks 23.0802 0.0 129.879 High High
cufflinks 13.949 0.0 71.4744    
cufflinks 5.62592 0.0 25.8065   Low
cufflinks 12.0233 0.0 58.6602    
cufflinks 6.97705 0.0 33.3073    
cufflinks 6.60157 0.0 33.4149    
cufflinks 0.627        
cufflinks 0.612        
cufflinks 0.775        
cufflinks 0.588        
cufflinks 0.98        
cufflinks 0.234       Low
cufflinks 0.915        
cufflinks 0.18       Low
cufflinks 2.747       High
cufflinks 1.229        
cufflinks 0.862        
cufflinks 0.798        
cufflinks 0.874        
cufflinks 1.057        
cufflinks 1.184        
cufflinks 0.905        
cufflinks 0.282       Low

0 Strain