Gene : Glyma.06G145400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31301:SF2 - LOB DOMAIN-CONTAINING PROTEIN 15 Genomic Order:  1454
Name:  ? Glyma.06G145400 Secondary Identifier:  ? PAC:30551548
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G145400 0.5kb upstream 0.5kb upstream 2702 true Chr06: 11863821-11866522 Glycine max
Glyma.06G145400 0.5kb upstream 0.5kb upstream 500 false Chr06: 11866023-11866522 Glycine max
Glyma.06G145400 0.5kb downstream 0.5kb downstream 2702 true Chr06: 11863321-11866022 Glycine max
Glyma.06G145400 0.5kb downstream 0.5kb downstream 500 false Chr06: 11863321-11863820 Glycine max
Glyma.06G145400 1.0kb upstream 1.0kb upstream 3202 true Chr06: 11863821-11867022 Glycine max
Glyma.06G145400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 11866023-11867022 Glycine max
Glyma.06G145400 1.0kb downstream 1.0kb downstream 3202 true Chr06: 11862821-11866022 Glycine max
Glyma.06G145400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 11862821-11863820 Glycine max
Glyma.06G145400 2.0kb upstream 2.0kb upstream 4202 true Chr06: 11863821-11868022 Glycine max
Glyma.06G145400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 11866023-11868022 Glycine max
Glyma.06G145400 2.0kb downstream 2.0kb downstream 4202 true Chr06: 11861821-11866022 Glycine max
Glyma.06G145400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 11861821-11863820 Glycine max
Glyma.06G145400 5.0kb upstream 5.0kb upstream 7202 true Chr06: 11863821-11871022 Glycine max
Glyma.06G145400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 11866023-11871022 Glycine max
Glyma.06G145400 5.0kb downstream 5.0kb downstream 7202 true Chr06: 11858821-11866022 Glycine max
Glyma.06G145400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 11858821-11863820 Glycine max
Glyma.06G145400 10.0kb upstream 10.0kb upstream 12202 true Chr06: 11863821-11876022 Glycine max
Glyma.06G145400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 11866023-11876022 Glycine max
Glyma.06G145400 10.0kb downstream 10.0kb downstream 12202 true Chr06: 11853821-11866022 Glycine max
Glyma.06G145400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11853821-11863820 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303683 5265 Fabidae View MSA
124067191 5270 Rosid View MSA
123746231 5271 Pentapetalae View MSA
122789083 5272 Eudicot View MSA
122043702 5273 Angiosperm View MSA
121351035 5274 Embryophyte View MSA
123381985 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0301331 0.0 0.128412 Low Low
cufflinks 0.171061 0.0 0.668465 Low  
cufflinks 0.417921 0.0 1.56813    
cufflinks 0.261751 0.0 1.00432    
cufflinks 3.05475 0.0 9.75916   High
cufflinks 3.63552 0.0 11.2941   High
cufflinks 0.62601 0.0 2.31217    
cufflinks 1.31309 0.0 4.6048    
cufflinks 1.28198 0.0 4.50555    
cufflinks 0.177        
cufflinks 0.086        
cufflinks 0.465        
cufflinks 2.393       High
cufflinks 3.509       High
cufflinks 0.017     Low Low
cufflinks 0.095     Low  
cufflinks 0.564        
cufflinks 2.233       High
cufflinks 0.176        
cufflinks 0.103        
cufflinks 0.154        
cufflinks 0.067     Low  
cufflinks 0.096     Low  
cufflinks 0.136        
cufflinks 0.076     Low  
cufflinks 0.192        

0 Strain