Gene : Glyma.06G147400 G. max Wm82.a2.v1
Defline:  (1 of 2) PF13371//PF14559 - Tetratricopeptide repeat (TPR_9) // Tetratricopeptide repeat (TPR_19) Genomic Order:  1474
Name:  ? Glyma.06G147400 Secondary Identifier:  ? PAC:30549176
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G147400 0.5kb upstream 0.5kb upstream 4679 true Chr06: 12008717-12013395 Glycine max
Glyma.06G147400 0.5kb upstream 0.5kb upstream 500 false Chr06: 12012896-12013395 Glycine max
Glyma.06G147400 0.5kb downstream 0.5kb downstream 4679 true Chr06: 12008217-12012895 Glycine max
Glyma.06G147400 0.5kb downstream 0.5kb downstream 500 false Chr06: 12008217-12008716 Glycine max
Glyma.06G147400 1.0kb upstream 1.0kb upstream 5179 true Chr06: 12008717-12013895 Glycine max
Glyma.06G147400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12012896-12013895 Glycine max
Glyma.06G147400 1.0kb downstream 1.0kb downstream 5179 true Chr06: 12007717-12012895 Glycine max
Glyma.06G147400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12007717-12008716 Glycine max
Glyma.06G147400 2.0kb upstream 2.0kb upstream 6179 true Chr06: 12008717-12014895 Glycine max
Glyma.06G147400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12012896-12014895 Glycine max
Glyma.06G147400 2.0kb downstream 2.0kb downstream 6179 true Chr06: 12006717-12012895 Glycine max
Glyma.06G147400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12006717-12008716 Glycine max
Glyma.06G147400 5.0kb upstream 5.0kb upstream 9179 true Chr06: 12008717-12017895 Glycine max
Glyma.06G147400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12012896-12017895 Glycine max
Glyma.06G147400 5.0kb downstream 5.0kb downstream 9179 true Chr06: 12003717-12012895 Glycine max
Glyma.06G147400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12003717-12008716 Glycine max
Glyma.06G147400 10.0kb upstream 10.0kb upstream 14179 true Chr06: 12008717-12022895 Glycine max
Glyma.06G147400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12012896-12022895 Glycine max
Glyma.06G147400 10.0kb downstream 10.0kb downstream 14179 true Chr06: 11998717-12012895 Glycine max
Glyma.06G147400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 11998717-12008716 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303198 5265 Fabidae View MSA
124065454 5270 Rosid View MSA
123736679 5271 Pentapetalae View MSA
122790556 5272 Eudicot View MSA
122050724 5273 Angiosperm View MSA
121348352 5274 Embryophyte View MSA
123426406 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.8236 0.0 37.8058   High
cufflinks 7.82966 0.0 28.9179    
cufflinks 5.16835 0.0 20.4801    
cufflinks 4.67525 0.0 16.4663    
cufflinks 6.14703 0.0 24.248    
cufflinks 4.57243 0.0 19.4324   Low
cufflinks 8.88011 0.0 32.2357   High
cufflinks 6.2614 0.0 20.6006    
cufflinks 4.64668 0.0 16.8874    
cufflinks 1.082        
cufflinks 0.273       Low
cufflinks 1.167        
cufflinks 1.125        
cufflinks 1.502        
cufflinks 0.266       Low
cufflinks 1.787        
cufflinks 0.442        
cufflinks 1.333        
cufflinks 1.766        
cufflinks 1.654        
cufflinks 0.284       Low
cufflinks 1.805        
cufflinks 2.713       High
cufflinks 0.36       Low
cufflinks 1.737        
cufflinks 0.301       Low

0 Strain