Gene : Glyma.06G148800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR13516//PTHR13516:SF9 - RIBONUCLEASE P SUBUNIT P25 Genomic Order:  1488
Name:  ? Glyma.06G148800 Secondary Identifier:  ? PAC:30553580
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G148800 0.5kb upstream 0.5kb upstream 4074 true Chr06: 12156984-12161057 Glycine max
Glyma.06G148800 0.5kb upstream 0.5kb upstream 500 false Chr06: 12156984-12157483 Glycine max
Glyma.06G148800 0.5kb downstream 0.5kb downstream 4074 true Chr06: 12157484-12161557 Glycine max
Glyma.06G148800 0.5kb downstream 0.5kb downstream 500 false Chr06: 12161058-12161557 Glycine max
Glyma.06G148800 1.0kb upstream 1.0kb upstream 4574 true Chr06: 12156484-12161057 Glycine max
Glyma.06G148800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 12156484-12157483 Glycine max
Glyma.06G148800 1.0kb downstream 1.0kb downstream 4574 true Chr06: 12157484-12162057 Glycine max
Glyma.06G148800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 12161058-12162057 Glycine max
Glyma.06G148800 2.0kb upstream 2.0kb upstream 5574 true Chr06: 12155484-12161057 Glycine max
Glyma.06G148800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 12155484-12157483 Glycine max
Glyma.06G148800 2.0kb downstream 2.0kb downstream 5574 true Chr06: 12157484-12163057 Glycine max
Glyma.06G148800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 12161058-12163057 Glycine max
Glyma.06G148800 5.0kb upstream 5.0kb upstream 8574 true Chr06: 12152484-12161057 Glycine max
Glyma.06G148800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 12152484-12157483 Glycine max
Glyma.06G148800 5.0kb downstream 5.0kb downstream 8574 true Chr06: 12157484-12166057 Glycine max
Glyma.06G148800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 12161058-12166057 Glycine max
Glyma.06G148800 10.0kb upstream 10.0kb upstream 13574 true Chr06: 12147484-12161057 Glycine max
Glyma.06G148800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 12147484-12157483 Glycine max
Glyma.06G148800 10.0kb downstream 10.0kb downstream 13574 true Chr06: 12157484-12171057 Glycine max
Glyma.06G148800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 12161058-12171057 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310078 5265 Fabidae View MSA
124072183 5270 Rosid View MSA
123752020 5271 Pentapetalae View MSA
122793375 5272 Eudicot View MSA
122050157 5273 Angiosperm View MSA
121346602 5274 Embryophyte View MSA
123428727 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.9966 0.0 46.0384    
cufflinks 13.4342 0.0 47.6667    
cufflinks 10.8742 0.0 40.0174    
cufflinks 13.0666 0.0 46.1993    
cufflinks 15.4588 0.0 53.0699    
cufflinks 7.33531 0.0 26.0586   Low
cufflinks 31.2673 0.0 103.948 High High
cufflinks 13.1689 0.0 47.1799    
cufflinks 17.8733 0.0 60.7088    
cufflinks 0.945       Low
cufflinks 1.439        
cufflinks 1.387        
cufflinks 1.178        
cufflinks 1.675        
cufflinks 6.483     High High
cufflinks 1.588        
cufflinks 0.93       Low
cufflinks 1.465        
cufflinks 1.795        
cufflinks 1.715        
cufflinks 1.481        
cufflinks 1.668        
cufflinks 1.678        
cufflinks 1.246        
cufflinks 1.684        
cufflinks 1.189        

0 Strain