Gene : Glyma.06G187500 G. max Wm82.a2.v1
Defline:  (1 of 2) PF02985//PF13513 - HEAT repeat (HEAT) // HEAT-like repeat (HEAT_EZ) Genomic Order:  1875
Name:  ? Glyma.06G187500 Secondary Identifier:  ? PAC:30554044
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G187500 0.5kb upstream 0.5kb upstream 5308 true Chr06: 16354258-16359565 Glycine max
Glyma.06G187500 0.5kb upstream 0.5kb upstream 500 false Chr06: 16354258-16354757 Glycine max
Glyma.06G187500 0.5kb downstream 0.5kb downstream 5308 true Chr06: 16354758-16360065 Glycine max
Glyma.06G187500 0.5kb downstream 0.5kb downstream 500 false Chr06: 16359566-16360065 Glycine max
Glyma.06G187500 1.0kb upstream 1.0kb upstream 5808 true Chr06: 16353758-16359565 Glycine max
Glyma.06G187500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16353758-16354757 Glycine max
Glyma.06G187500 1.0kb downstream 1.0kb downstream 5808 true Chr06: 16354758-16360565 Glycine max
Glyma.06G187500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16359566-16360565 Glycine max
Glyma.06G187500 2.0kb upstream 2.0kb upstream 6808 true Chr06: 16352758-16359565 Glycine max
Glyma.06G187500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16352758-16354757 Glycine max
Glyma.06G187500 2.0kb downstream 2.0kb downstream 6808 true Chr06: 16354758-16361565 Glycine max
Glyma.06G187500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16359566-16361565 Glycine max
Glyma.06G187500 5.0kb upstream 5.0kb upstream 9808 true Chr06: 16349758-16359565 Glycine max
Glyma.06G187500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16349758-16354757 Glycine max
Glyma.06G187500 5.0kb downstream 5.0kb downstream 9808 true Chr06: 16354758-16364565 Glycine max
Glyma.06G187500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16359566-16364565 Glycine max
Glyma.06G187500 10.0kb upstream 10.0kb upstream 14808 true Chr06: 16344758-16359565 Glycine max
Glyma.06G187500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16344758-16354757 Glycine max
Glyma.06G187500 10.0kb downstream 10.0kb downstream 14808 true Chr06: 16354758-16369565 Glycine max
Glyma.06G187500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16359566-16369565 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041018 5273 Angiosperm View MSA
122311359 5265 Fabidae View MSA
124069706 5270 Rosid View MSA
123745990 5271 Pentapetalae View MSA
122793911 5272 Eudicot View MSA
121309785 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.52262 0.0 14.4179    
cufflinks 7.24955 0.0 25.0947    
cufflinks 3.33222 0.0 11.4295   Low
cufflinks 28.711 0.0 111.874 High High
cufflinks 8.52934 0.0 29.4155    
cufflinks 4.79655 0.0 17.5819    
cufflinks 14.1329 0.0 48.8832    
cufflinks 23.6057 0.0 87.4822 High High
cufflinks 6.25247 0.0 22.0068    
cufflinks 7.26       High
cufflinks 1.005       Low
cufflinks 2.127        
cufflinks 2.57        
cufflinks 1.538        
cufflinks 0.633       Low
cufflinks 6.186       High
cufflinks 3.149        
cufflinks 4.878        
cufflinks 3.124        
cufflinks 5.552        
cufflinks 2.603        
cufflinks 5.594        
cufflinks 4.643        
cufflinks 1.082       Low
cufflinks 5.328        
cufflinks 1.822        

0 Strain