Gene : Glyma.06G187900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31448:SF9 - F14D16.14 Genomic Order:  1879
Name:  ? Glyma.06G187900 Secondary Identifier:  ? PAC:30552291
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G187900 0.5kb upstream 0.5kb upstream 3992 true Chr06: 16402098-16406089 Glycine max
Glyma.06G187900 0.5kb upstream 0.5kb upstream 500 false Chr06: 16402098-16402597 Glycine max
Glyma.06G187900 0.5kb downstream 0.5kb downstream 3992 true Chr06: 16402598-16406589 Glycine max
Glyma.06G187900 0.5kb downstream 0.5kb downstream 500 false Chr06: 16406090-16406589 Glycine max
Glyma.06G187900 1.0kb upstream 1.0kb upstream 4492 true Chr06: 16401598-16406089 Glycine max
Glyma.06G187900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16401598-16402597 Glycine max
Glyma.06G187900 1.0kb downstream 1.0kb downstream 4492 true Chr06: 16402598-16407089 Glycine max
Glyma.06G187900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16406090-16407089 Glycine max
Glyma.06G187900 2.0kb upstream 2.0kb upstream 5492 true Chr06: 16400598-16406089 Glycine max
Glyma.06G187900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16400598-16402597 Glycine max
Glyma.06G187900 2.0kb downstream 2.0kb downstream 5492 true Chr06: 16402598-16408089 Glycine max
Glyma.06G187900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16406090-16408089 Glycine max
Glyma.06G187900 5.0kb upstream 5.0kb upstream 8492 true Chr06: 16397598-16406089 Glycine max
Glyma.06G187900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16397598-16402597 Glycine max
Glyma.06G187900 5.0kb downstream 5.0kb downstream 8492 true Chr06: 16402598-16411089 Glycine max
Glyma.06G187900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16406090-16411089 Glycine max
Glyma.06G187900 10.0kb upstream 10.0kb upstream 13492 true Chr06: 16392598-16406089 Glycine max
Glyma.06G187900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16392598-16402597 Glycine max
Glyma.06G187900 10.0kb downstream 10.0kb downstream 13492 true Chr06: 16402598-16416089 Glycine max
Glyma.06G187900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16406090-16416089 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299901 5265 Fabidae View MSA
124065476 5270 Rosid View MSA
123743905 5271 Pentapetalae View MSA
122791217 5272 Eudicot View MSA
122050916 5273 Angiosperm View MSA
121351297 5274 Embryophyte View MSA
123382108 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0241882 0.0 0.099575 Low Low
cufflinks 0.26596 0.0 0.987948    
cufflinks 0.743524 0.0 2.57141   High
cufflinks 0.793825 0.0 2.73136   High
cufflinks 0.0278549 0.0 0.113825 Low Low
cufflinks 0.0135628 0.0 0.0581235 Low Low
cufflinks 0.261753 0.0 0.974631    
cufflinks 0.224748 0.0 0.840989 Low  
cufflinks 0.308822 0.0 1.13841    
cufflinks 0.153        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.314       High
cufflinks 0.032     Low  
cufflinks 0.045     Low  
cufflinks 0.017     Low  
cufflinks 0.05     Low  
cufflinks 0.005     Low Low
cufflinks 1.861       High
cufflinks 0.098     Low  
cufflinks 0.064     Low  
cufflinks 0.013     Low  
cufflinks 0.079     Low  
cufflinks 0.039     Low  
cufflinks 0.005     Low Low
cufflinks 0.062     Low  
cufflinks 0.012     Low  

0 Strain