Gene : Glyma.06G188400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10641:SF649 - MYB TRANSCRIPTION FACTOR Genomic Order:  1884
Name:  ? Glyma.06G188400 Secondary Identifier:  ? PAC:30553141
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G188400 0.5kb upstream 0.5kb upstream 2281 true Chr06: 16431680-16433960 Glycine max
Glyma.06G188400 0.5kb upstream 0.5kb upstream 500 false Chr06: 16433461-16433960 Glycine max
Glyma.06G188400 0.5kb downstream 0.5kb downstream 2281 true Chr06: 16431180-16433460 Glycine max
Glyma.06G188400 0.5kb downstream 0.5kb downstream 500 false Chr06: 16431180-16431679 Glycine max
Glyma.06G188400 1.0kb upstream 1.0kb upstream 2781 true Chr06: 16431680-16434460 Glycine max
Glyma.06G188400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16433461-16434460 Glycine max
Glyma.06G188400 1.0kb downstream 1.0kb downstream 2781 true Chr06: 16430680-16433460 Glycine max
Glyma.06G188400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16430680-16431679 Glycine max
Glyma.06G188400 2.0kb upstream 2.0kb upstream 3781 true Chr06: 16431680-16435460 Glycine max
Glyma.06G188400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16433461-16435460 Glycine max
Glyma.06G188400 2.0kb downstream 2.0kb downstream 3781 true Chr06: 16429680-16433460 Glycine max
Glyma.06G188400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16429680-16431679 Glycine max
Glyma.06G188400 5.0kb upstream 5.0kb upstream 6781 true Chr06: 16431680-16438460 Glycine max
Glyma.06G188400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16433461-16438460 Glycine max
Glyma.06G188400 5.0kb downstream 5.0kb downstream 6781 true Chr06: 16426680-16433460 Glycine max
Glyma.06G188400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16426680-16431679 Glycine max
Glyma.06G188400 10.0kb upstream 10.0kb upstream 11781 true Chr06: 16431680-16443460 Glycine max
Glyma.06G188400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16433461-16443460 Glycine max
Glyma.06G188400 10.0kb downstream 10.0kb downstream 11781 true Chr06: 16421680-16433460 Glycine max
Glyma.06G188400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16421680-16431679 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308399 5265 Fabidae View MSA
124071905 5270 Rosid View MSA
123742365 5271 Pentapetalae View MSA
122786353 5272 Eudicot View MSA
122041788 5273 Angiosperm View MSA
121350452 5274 Embryophyte View MSA
123381739 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0487753 0.0 0.207856 Low  
cufflinks 0.212315 0.0 0.838433 Low High
cufflinks 0.0299661 0.0 0.132639 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0212777 0.0 0.0974561 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.144354 0.0 0.57792 Low  
cufflinks 0.008     Low Low
cufflinks 0.011     Low  
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.82       High
cufflinks 0.065     Low  
cufflinks 0.067     Low  
cufflinks 0.02     Low  
cufflinks 0.073     Low  
cufflinks 0.069     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.058     Low  
cufflinks 0.016     Low  

0 Strain