Gene : Glyma.06G188900 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.1.5.2 - Quinoprotein glucose dehydrogenase (PQQ, quinone) / Quinoprotein D-glucose dehydrogenase Genomic Order:  1889
Name:  ? Glyma.06G188900 Secondary Identifier:  ? PAC:30549426
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax GLUCOSE1PMETAB-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G188900 0.5kb upstream 0.5kb upstream 5872 true Chr06: 16472025-16477896 Glycine max
Glyma.06G188900 0.5kb upstream 0.5kb upstream 500 false Chr06: 16477397-16477896 Glycine max
Glyma.06G188900 0.5kb downstream 0.5kb downstream 5872 true Chr06: 16471525-16477396 Glycine max
Glyma.06G188900 0.5kb downstream 0.5kb downstream 500 false Chr06: 16471525-16472024 Glycine max
Glyma.06G188900 1.0kb upstream 1.0kb upstream 6372 true Chr06: 16472025-16478396 Glycine max
Glyma.06G188900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16477397-16478396 Glycine max
Glyma.06G188900 1.0kb downstream 1.0kb downstream 6372 true Chr06: 16471025-16477396 Glycine max
Glyma.06G188900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16471025-16472024 Glycine max
Glyma.06G188900 2.0kb upstream 2.0kb upstream 7372 true Chr06: 16472025-16479396 Glycine max
Glyma.06G188900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16477397-16479396 Glycine max
Glyma.06G188900 2.0kb downstream 2.0kb downstream 7372 true Chr06: 16470025-16477396 Glycine max
Glyma.06G188900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16470025-16472024 Glycine max
Glyma.06G188900 5.0kb upstream 5.0kb upstream 10372 true Chr06: 16472025-16482396 Glycine max
Glyma.06G188900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16477397-16482396 Glycine max
Glyma.06G188900 5.0kb downstream 5.0kb downstream 10372 true Chr06: 16467025-16477396 Glycine max
Glyma.06G188900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16467025-16472024 Glycine max
Glyma.06G188900 10.0kb upstream 10.0kb upstream 15372 true Chr06: 16472025-16487396 Glycine max
Glyma.06G188900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16477397-16487396 Glycine max
Glyma.06G188900 10.0kb downstream 10.0kb downstream 15372 true Chr06: 16462025-16477396 Glycine max
Glyma.06G188900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16462025-16472024 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302882 5265 Fabidae View MSA
124061288 5270 Rosid View MSA
123749936 5271 Pentapetalae View MSA
122794140 5272 Eudicot View MSA
122045052 5273 Angiosperm View MSA
121344764 5274 Embryophyte View MSA
123380098 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.69644 0.0 20.6426    
cufflinks 5.42763 0.0 14.814    
cufflinks 1.69127 0.0 5.26168   Low
cufflinks 2.3313 0.0 6.95222    
cufflinks 15.7507 0.0 42.3491    
cufflinks 71.1683 0.0 231.021 High High
cufflinks 2.06387 0.0 6.28089    
cufflinks 2.34274 0.0 6.98224    
cufflinks 16.9462 0.0 45.7476    
cufflinks 3.017        
cufflinks 21.325     High High
cufflinks 1.724       Low
cufflinks 19.181     High  
cufflinks 6.283        
cufflinks 2.067        
cufflinks 2.878        
cufflinks 22.158     High High
cufflinks 1.679       Low
cufflinks 5.047        
cufflinks 1.786       Low
cufflinks 47.601     High High
cufflinks 3.269        
cufflinks 4.255        
cufflinks 33.857     High High
cufflinks 2.135        
cufflinks 23.999     High High

0 Strain