Gene : Glyma.06G190200 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG0490 - Transcription factor, contains HOX domain Genomic Order:  1902
Name:  ? Glyma.06G190200 Secondary Identifier:  ? PAC:30550473
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G190200 0.5kb upstream 0.5kb upstream 3026 true Chr06: 16703967-16706992 Glycine max
Glyma.06G190200 0.5kb upstream 0.5kb upstream 500 false Chr06: 16706493-16706992 Glycine max
Glyma.06G190200 0.5kb downstream 0.5kb downstream 3026 true Chr06: 16703467-16706492 Glycine max
Glyma.06G190200 0.5kb downstream 0.5kb downstream 500 false Chr06: 16703467-16703966 Glycine max
Glyma.06G190200 1.0kb upstream 1.0kb upstream 3526 true Chr06: 16703967-16707492 Glycine max
Glyma.06G190200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16706493-16707492 Glycine max
Glyma.06G190200 1.0kb downstream 1.0kb downstream 3526 true Chr06: 16702967-16706492 Glycine max
Glyma.06G190200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16702967-16703966 Glycine max
Glyma.06G190200 2.0kb upstream 2.0kb upstream 4526 true Chr06: 16703967-16708492 Glycine max
Glyma.06G190200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16706493-16708492 Glycine max
Glyma.06G190200 2.0kb downstream 2.0kb downstream 4526 true Chr06: 16701967-16706492 Glycine max
Glyma.06G190200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16701967-16703966 Glycine max
Glyma.06G190200 5.0kb upstream 5.0kb upstream 7526 true Chr06: 16703967-16711492 Glycine max
Glyma.06G190200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16706493-16711492 Glycine max
Glyma.06G190200 5.0kb downstream 5.0kb downstream 7526 true Chr06: 16698967-16706492 Glycine max
Glyma.06G190200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16698967-16703966 Glycine max
Glyma.06G190200 10.0kb upstream 10.0kb upstream 12526 true Chr06: 16703967-16716492 Glycine max
Glyma.06G190200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16706493-16716492 Glycine max
Glyma.06G190200 10.0kb downstream 10.0kb downstream 12526 true Chr06: 16693967-16706492 Glycine max
Glyma.06G190200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16693967-16703966 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304881 5265 Fabidae View MSA
124070886 5270 Rosid View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.7193 0.0 184.543 High  
cufflinks 20.1881 0.0 53.8751 High  
cufflinks 51.8166 0.0 146.372 High  
cufflinks 55.8414 0.0 159.272 High  
cufflinks 38.5244 0.0 105.739 High  
cufflinks 21.2303 0.0 56.6843    
cufflinks 22.9525 0.0 61.3776 High  
cufflinks 96.6452 0.0 300.005 High High
cufflinks 17.9627 0.0 47.925   Low
cufflinks 42.308     High High
cufflinks 1.915       Low
cufflinks 37.384     High High
cufflinks 13.826     High  
cufflinks 9.499     High  
cufflinks 1.149       Low
cufflinks 18.85     High  
cufflinks 13.127     High  
cufflinks 12.664     High  
cufflinks 12.813     High  
cufflinks 13.594     High  
cufflinks 1.91       Low
cufflinks 22.571     High  
cufflinks 14.75     High  
cufflinks 3.656        
cufflinks 17.796     High  
cufflinks 5.267        

0 Strain