Gene : Glyma.06G191300 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG0059 - Lipid exporter ABCA1 and related proteins, ABC superfamily Genomic Order:  1913
Name:  ? Glyma.06G191300 Secondary Identifier:  ? PAC:30550323
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G191300 0.5kb upstream 0.5kb upstream 7262 true Chr06: 16805742-16813003 Glycine max
Glyma.06G191300 0.5kb upstream 0.5kb upstream 500 false Chr06: 16812504-16813003 Glycine max
Glyma.06G191300 0.5kb downstream 0.5kb downstream 7262 true Chr06: 16805242-16812503 Glycine max
Glyma.06G191300 0.5kb downstream 0.5kb downstream 500 false Chr06: 16805242-16805741 Glycine max
Glyma.06G191300 1.0kb upstream 1.0kb upstream 7762 true Chr06: 16805742-16813503 Glycine max
Glyma.06G191300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16812504-16813503 Glycine max
Glyma.06G191300 1.0kb downstream 1.0kb downstream 7762 true Chr06: 16804742-16812503 Glycine max
Glyma.06G191300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16804742-16805741 Glycine max
Glyma.06G191300 2.0kb upstream 2.0kb upstream 8762 true Chr06: 16805742-16814503 Glycine max
Glyma.06G191300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16812504-16814503 Glycine max
Glyma.06G191300 2.0kb downstream 2.0kb downstream 8762 true Chr06: 16803742-16812503 Glycine max
Glyma.06G191300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16803742-16805741 Glycine max
Glyma.06G191300 5.0kb upstream 5.0kb upstream 11762 true Chr06: 16805742-16817503 Glycine max
Glyma.06G191300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16812504-16817503 Glycine max
Glyma.06G191300 5.0kb downstream 5.0kb downstream 11762 true Chr06: 16800742-16812503 Glycine max
Glyma.06G191300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16800742-16805741 Glycine max
Glyma.06G191300 10.0kb upstream 10.0kb upstream 16762 true Chr06: 16805742-16822503 Glycine max
Glyma.06G191300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16812504-16822503 Glycine max
Glyma.06G191300 10.0kb downstream 10.0kb downstream 16762 true Chr06: 16795742-16812503 Glycine max
Glyma.06G191300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16795742-16805741 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301698 5265 Fabidae View MSA
124067078 5270 Rosid View MSA
123750252 5271 Pentapetalae View MSA
122786986 5272 Eudicot View MSA
122046360 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121347402 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.78092 0.0 26.7299    
cufflinks 1.71023 0.0 6.9463   Low
cufflinks 25.8496 0.0 101.624 High High
cufflinks 11.1664 0.0 38.392    
cufflinks 7.75319 0.0 23.1813    
cufflinks 19.2271 0.0 70.6031   High
cufflinks 11.3832 0.0 39.2036    
cufflinks 4.60033 0.0 14.3567    
cufflinks 5.01825 0.0 17.8959    
cufflinks 3.656        
cufflinks 22.535     High High
cufflinks 8.236     High  
cufflinks 3.067        
cufflinks 0.741        
cufflinks 8.477     High  
cufflinks 0.635       Low
cufflinks 38.489     High High
cufflinks 3.08        
cufflinks 0.848        
cufflinks 0.449       Low
cufflinks 16.501     High  
cufflinks 0.612       Low
cufflinks 0.879        
cufflinks 23.364     High High
cufflinks 0.582       Low
cufflinks 34.304     High High

0 Strain