Gene : Glyma.06G192000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12388//PTHR12388:SF1 - MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE Genomic Order:  1920
Name:  ? Glyma.06G192000 Secondary Identifier:  ? PAC:30549142
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G192000 0.5kb upstream 0.5kb upstream 8026 true Chr06: 16953259-16961284 Glycine max
Glyma.06G192000 0.5kb upstream 0.5kb upstream 500 false Chr06: 16953259-16953758 Glycine max
Glyma.06G192000 0.5kb downstream 0.5kb downstream 8026 true Chr06: 16953759-16961784 Glycine max
Glyma.06G192000 0.5kb downstream 0.5kb downstream 500 false Chr06: 16961285-16961784 Glycine max
Glyma.06G192000 1.0kb upstream 1.0kb upstream 8526 true Chr06: 16952759-16961284 Glycine max
Glyma.06G192000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 16952759-16953758 Glycine max
Glyma.06G192000 1.0kb downstream 1.0kb downstream 8526 true Chr06: 16953759-16962284 Glycine max
Glyma.06G192000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 16961285-16962284 Glycine max
Glyma.06G192000 2.0kb upstream 2.0kb upstream 9526 true Chr06: 16951759-16961284 Glycine max
Glyma.06G192000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 16951759-16953758 Glycine max
Glyma.06G192000 2.0kb downstream 2.0kb downstream 9526 true Chr06: 16953759-16963284 Glycine max
Glyma.06G192000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 16961285-16963284 Glycine max
Glyma.06G192000 5.0kb upstream 5.0kb upstream 12526 true Chr06: 16948759-16961284 Glycine max
Glyma.06G192000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 16948759-16953758 Glycine max
Glyma.06G192000 5.0kb downstream 5.0kb downstream 12526 true Chr06: 16953759-16966284 Glycine max
Glyma.06G192000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 16961285-16966284 Glycine max
Glyma.06G192000 10.0kb upstream 10.0kb upstream 17526 true Chr06: 16943759-16961284 Glycine max
Glyma.06G192000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 16943759-16953758 Glycine max
Glyma.06G192000 10.0kb downstream 10.0kb downstream 17526 true Chr06: 16953759-16971284 Glycine max
Glyma.06G192000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 16961285-16971284 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030134 5273 Angiosperm View MSA
122239694 5265 Fabidae Singleton cluster - no MSA
123984890 5270 Rosid Singleton cluster - no MSA
123560366 5271 Pentapetalae Singleton cluster - no MSA
122595167 5272 Eudicot Singleton cluster - no MSA
121299354 5274 Embryophyte View MSA
123426047 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.04469 0.0 27.4953    
cufflinks 7.99649 0.0 24.7201    
cufflinks 13.0703 0.0 37.6265   High
cufflinks 8.18699 0.0 25.1565    
cufflinks 7.86611 0.0 24.3961    
cufflinks 8.34493 0.0 25.6525    
cufflinks 10.4933 0.0 31.1949    
cufflinks 8.87534 0.0 26.9847    
cufflinks 9.27371 0.0 28.0453    
cufflinks 0.986        
cufflinks 1.672       High
cufflinks 1.511        
cufflinks 1.301        
cufflinks 1.426        
cufflinks 1.279        
cufflinks 1.004        
cufflinks 1.018        
cufflinks 1.609       High
cufflinks 1.134        
cufflinks 0.834       Low
cufflinks 1.693       High
cufflinks 1.132        
cufflinks 0.863       Low
cufflinks 1.729       High
cufflinks 0.993        
cufflinks 1.339        

0 Strain