Gene : Glyma.06G194500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22835//PTHR22835:SF267 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  1945
Name:  ? Glyma.06G194500 Secondary Identifier:  ? PAC:30552151
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax LIPAS-PWY Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G194500 0.5kb upstream 0.5kb upstream 4761 true Chr06: 17327080-17331840 Glycine max
Glyma.06G194500 0.5kb upstream 0.5kb upstream 500 false Chr06: 17327080-17327579 Glycine max
Glyma.06G194500 0.5kb downstream 0.5kb downstream 4761 true Chr06: 17327580-17332340 Glycine max
Glyma.06G194500 0.5kb downstream 0.5kb downstream 500 false Chr06: 17331841-17332340 Glycine max
Glyma.06G194500 1.0kb upstream 1.0kb upstream 5261 true Chr06: 17326580-17331840 Glycine max
Glyma.06G194500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17326580-17327579 Glycine max
Glyma.06G194500 1.0kb downstream 1.0kb downstream 5261 true Chr06: 17327580-17332840 Glycine max
Glyma.06G194500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17331841-17332840 Glycine max
Glyma.06G194500 2.0kb upstream 2.0kb upstream 6261 true Chr06: 17325580-17331840 Glycine max
Glyma.06G194500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17325580-17327579 Glycine max
Glyma.06G194500 2.0kb downstream 2.0kb downstream 6261 true Chr06: 17327580-17333840 Glycine max
Glyma.06G194500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17331841-17333840 Glycine max
Glyma.06G194500 5.0kb upstream 5.0kb upstream 9261 true Chr06: 17322580-17331840 Glycine max
Glyma.06G194500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17322580-17327579 Glycine max
Glyma.06G194500 5.0kb downstream 5.0kb downstream 9261 true Chr06: 17327580-17336840 Glycine max
Glyma.06G194500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17331841-17336840 Glycine max
Glyma.06G194500 10.0kb upstream 10.0kb upstream 14261 true Chr06: 17317580-17331840 Glycine max
Glyma.06G194500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17317580-17327579 Glycine max
Glyma.06G194500 10.0kb downstream 10.0kb downstream 14261 true Chr06: 17327580-17341840 Glycine max
Glyma.06G194500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17331841-17341840 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300197 5265 Fabidae View MSA
124065806 5270 Rosid View MSA
123747165 5271 Pentapetalae View MSA
122791413 5272 Eudicot View MSA
122042370 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0547517 0.0 0.223108 Low Low
cufflinks 0.339995 0.0 1.70876    
cufflinks 0.685447 0.0 4.12669    
cufflinks 0.0189014 0.0 0.091748 Low Low
cufflinks 1.71515 0.0 8.88232   High
cufflinks 0.610323 0.0 3.99508    
cufflinks 0.138335 0.0 0.548441 Low  
cufflinks 0.584645 0.0 3.6351    
cufflinks 1.87802 0.0 9.78721   High
cufflinks 0.018     Low  
cufflinks 0.026     Low  
cufflinks 0.044     Low  
cufflinks 0.009     Low  
cufflinks 0.002     Low Low
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.44       High
cufflinks 0.028     Low  
cufflinks 0.163       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.031     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117        

0 Strain