Gene : Glyma.06G179800 G. max Wm82.a2.v1
Defline:  (1 of 11) PTHR24320:SF81 - NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN Genomic Order:  1798
Name:  ? Glyma.06G179800 Secondary Identifier:  ? PAC:30553189
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5080 Glycine max pathologic  
Gmax PWY-6433 Glycine max pathologic  
Gmax PWY-6598 Glycine max pathologic  
Gmax PWY-7036 Glycine max pathologic  
Gmax PWY-7601 Glycine max pathologic  
Gmax PWY-7606 Glycine max pathologic  
Gmax PWY-7619 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G179800 0.5kb upstream 0.5kb upstream 4641 true Chr06: 15259260-15263900 Glycine max
Glyma.06G179800 0.5kb upstream 0.5kb upstream 500 false Chr06: 15259260-15259759 Glycine max
Glyma.06G179800 0.5kb downstream 0.5kb downstream 4641 true Chr06: 15259760-15264400 Glycine max
Glyma.06G179800 0.5kb downstream 0.5kb downstream 500 false Chr06: 15263901-15264400 Glycine max
Glyma.06G179800 1.0kb upstream 1.0kb upstream 5141 true Chr06: 15258760-15263900 Glycine max
Glyma.06G179800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15258760-15259759 Glycine max
Glyma.06G179800 1.0kb downstream 1.0kb downstream 5141 true Chr06: 15259760-15264900 Glycine max
Glyma.06G179800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15263901-15264900 Glycine max
Glyma.06G179800 2.0kb upstream 2.0kb upstream 6141 true Chr06: 15257760-15263900 Glycine max
Glyma.06G179800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15257760-15259759 Glycine max
Glyma.06G179800 2.0kb downstream 2.0kb downstream 6141 true Chr06: 15259760-15265900 Glycine max
Glyma.06G179800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15263901-15265900 Glycine max
Glyma.06G179800 5.0kb upstream 5.0kb upstream 9141 true Chr06: 15254760-15263900 Glycine max
Glyma.06G179800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15254760-15259759 Glycine max
Glyma.06G179800 5.0kb downstream 5.0kb downstream 9141 true Chr06: 15259760-15268900 Glycine max
Glyma.06G179800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15263901-15268900 Glycine max
Glyma.06G179800 10.0kb upstream 10.0kb upstream 14141 true Chr06: 15249760-15263900 Glycine max
Glyma.06G179800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15249760-15259759 Glycine max
Glyma.06G179800 10.0kb downstream 10.0kb downstream 14141 true Chr06: 15259760-15273900 Glycine max
Glyma.06G179800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15263901-15273900 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310361 5265 Fabidae View MSA
124064141 5270 Rosid View MSA
123748222 5271 Pentapetalae View MSA
122791210 5272 Eudicot View MSA
122047587 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121310767 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.898556 0.0 3.25893    
cufflinks 3.07506 0.0 9.84045    
cufflinks 0.962989 0.0 3.46744    
cufflinks 6.02955 0.0 17.542   High
cufflinks 0.696299 0.0 2.56349    
cufflinks 0.148213 0.0 0.583974 Low Low
cufflinks 7.00419 0.0 20.1125   High
cufflinks 4.7245 0.0 14.2083    
cufflinks 0.619822 0.0 2.29329    
cufflinks 1.72        
cufflinks 0.116        
cufflinks 0.774        
cufflinks 0.027     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.238        
cufflinks 2.328        
cufflinks 0.114        
cufflinks 0.925        
cufflinks 0.675        
cufflinks 3.416       High
cufflinks 0.091       Low
cufflinks 2.843       High
cufflinks 1.374        
cufflinks 0.042     Low Low
cufflinks 3.166       High
cufflinks 0.229        

0 Strain