Gene : Glyma.06G174000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10694:SF38 - LYSINE-SPECIFIC DEMETHYLASE REF6 Genomic Order:  1740
Name:  ? Glyma.06G174000 Secondary Identifier:  ? PAC:30549321
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G174000 0.5kb upstream 0.5kb upstream 16758 true Chr06: 14684775-14701532 Glycine max
Glyma.06G174000 0.5kb upstream 0.5kb upstream 500 false Chr06: 14701033-14701532 Glycine max
Glyma.06G174000 0.5kb downstream 0.5kb downstream 16758 true Chr06: 14684275-14701032 Glycine max
Glyma.06G174000 0.5kb downstream 0.5kb downstream 500 false Chr06: 14684275-14684774 Glycine max
Glyma.06G174000 1.0kb upstream 1.0kb upstream 17258 true Chr06: 14684775-14702032 Glycine max
Glyma.06G174000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14701033-14702032 Glycine max
Glyma.06G174000 1.0kb downstream 1.0kb downstream 17258 true Chr06: 14683775-14701032 Glycine max
Glyma.06G174000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14683775-14684774 Glycine max
Glyma.06G174000 2.0kb upstream 2.0kb upstream 18258 true Chr06: 14684775-14703032 Glycine max
Glyma.06G174000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14701033-14703032 Glycine max
Glyma.06G174000 2.0kb downstream 2.0kb downstream 18258 true Chr06: 14682775-14701032 Glycine max
Glyma.06G174000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14682775-14684774 Glycine max
Glyma.06G174000 5.0kb upstream 5.0kb upstream 21258 true Chr06: 14684775-14706032 Glycine max
Glyma.06G174000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14701033-14706032 Glycine max
Glyma.06G174000 5.0kb downstream 5.0kb downstream 21258 true Chr06: 14679775-14701032 Glycine max
Glyma.06G174000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14679775-14684774 Glycine max
Glyma.06G174000 10.0kb upstream 10.0kb upstream 26258 true Chr06: 14684775-14711032 Glycine max
Glyma.06G174000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14701033-14711032 Glycine max
Glyma.06G174000 10.0kb downstream 10.0kb downstream 26258 true Chr06: 14674775-14701032 Glycine max
Glyma.06G174000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14674775-14684774 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314341 5265 Fabidae View MSA
124060683 5270 Rosid View MSA
123752621 5271 Pentapetalae View MSA
122794300 5272 Eudicot View MSA
122042363 5273 Angiosperm View MSA
123428928 5275 Viridiplantae View MSA
121351254 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.30536 0.0 9.82669    
cufflinks 7.88167 0.0 33.5618   High
cufflinks 1.42102 0.0 4.47569   Low
cufflinks 3.11685 0.0 14.6477    
cufflinks 4.21481 0.0 12.6436    
cufflinks 1.94187 0.0 5.97432   Low
cufflinks 2.95709 0.0 13.1541    
cufflinks 2.83284 0.0 8.42735    
cufflinks 3.80181 0.0 11.3782    
cufflinks 0.593        
cufflinks 0.054       Low
cufflinks 0.626        
cufflinks 0.948        
cufflinks 1.315        
cufflinks 0.213        
cufflinks 1.048        
cufflinks 0.201        
cufflinks 1.108        
cufflinks 1.798       High
cufflinks 1.122        
cufflinks 0.097       Low
cufflinks 1.267        
cufflinks 1.154        
cufflinks 0.122       Low
cufflinks 1.22        
cufflinks 0.246        

0 Strain